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The map label for this gene is deoC [H]

Identifier: 126695757

GI number: 126695757

Start: 364694

End: 365353

Strand: Reverse

Name: deoC [H]

Synonym: P9301_04191

Alternate gene names: 126695757

Gene position: 365353-364694 (Counterclockwise)

Preceding gene: 126695758

Following gene: 126695756

Centisome position: 22.25

GC content: 28.79

Gene sequence:

>660_bases
ATGCCCAATATTGAATATGAATTAAACAAGAAAATTCATGCGATTATTATTAACCCTTATTTATCATGGGAAGATTTCTC
TGTGAATTGCGATTTAATAAGAAAATACAATATCAAAAATATTTCTACTTCACTAAATTATTTAACTGATCTTAAAAACT
GTTTGGACAATTACAGTGCGGATATAAACGCACTTATTTCTTACCCTTTAGCAGATTTACCAGTTTCATTTATTGAAGAA
TTAGTTTGTTTTGCAAAAGATAAGGGTGCAAAAGGGATTGAATATATCCCAAACTTTATCAATTTATCCAAAAAAAATTT
AGAAACTTTCGCTGCTGAAATTGAGCAAGTTAAATTATCCGGATTACCAGTTTCAATAATCATAAATAAATCAAAACTAC
AAGAAGAAGTTTTTATTAATGCGATAGAAATATGTTTGGAATTAGGAATAAAAAATTTTCAATTCGGGGACGGGTTTGGA
TCTCCTCTTACATCCAATGATGTCCGCGAAATACTAAAAATAACAGGCTCTCAAAATCAAATCAAAGTTGTAGGTGGCAT
AAAAAAACTGACGCAAGTAATTGATTTGTTTGATAATGGAATTAGTTGCGTGGGAACTTCCAATTTTTCTGAAATTTTTG
AAGAAGTAAAAATTATTTAA

Upstream 100 bases:

>100_bases
GATTTTTATGTTTTTCGAAACAAGAAAAATAATGAACTTCAAGTTATATATAAAAGGAATCATGGAGGTTATGGACTGAT
TCAATCTAAATAAGTTTTAA

Downstream 100 bases:

>100_bases
ATGTCTGGTTCTGGTGAGTGCAGACTAAAAGGTCTCTGTATTAAAGCTTCTCCATTAGGCGAGAATGATAGATTAATAAC
TATCCTTACTGATGAGCAAG

Product: putative deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPNIEYELNKKIHAIIINPYLSWEDFSVNCDLIRKYNIKNISTSLNYLTDLKNCLDNYSADINALISYPLADLPVSFIEE
LVCFAKDKGAKGIEYIPNFINLSKKNLETFAAEIEQVKLSGLPVSIIINKSKLQEEVFINAIEICLELGIKNFQFGDGFG
SPLTSNDVREILKITGSQNQIKVVGGIKKLTQVIDLFDNGISCVGTSNFSEIFEEVKII

Sequences:

>Translated_219_residues
MPNIEYELNKKIHAIIINPYLSWEDFSVNCDLIRKYNIKNISTSLNYLTDLKNCLDNYSADINALISYPLADLPVSFIEE
LVCFAKDKGAKGIEYIPNFINLSKKNLETFAAEIEQVKLSGLPVSIIINKSKLQEEVFINAIEICLELGIKNFQFGDGFG
SPLTSNDVREILKITGSQNQIKVVGGIKKLTQVIDLFDNGISCVGTSNFSEIFEEVKII
>Mature_218_residues
PNIEYELNKKIHAIIINPYLSWEDFSVNCDLIRKYNIKNISTSLNYLTDLKNCLDNYSADINALISYPLADLPVSFIEEL
VCFAKDKGAKGIEYIPNFINLSKKNLETFAAEIEQVKLSGLPVSIIINKSKLQEEVFINAIEICLELGIKNFQFGDGFGS
PLTSNDVREILKITGSQNQIKVVGGIKKLTQVIDLFDNGISCVGTSNFSEIFEEVKII

Specific function: Unknown

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915
- InterPro:   IPR022979 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 24536; Mature: 24404

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNIEYELNKKIHAIIINPYLSWEDFSVNCDLIRKYNIKNISTSLNYLTDLKNCLDNYSA
CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHCCC
DINALISYPLADLPVSFIEELVCFAKDKGAKGIEYIPNFINLSKKNLETFAAEIEQVKLS
CHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHC
GLPVSIIINKSKLQEEVFINAIEICLELGIKNFQFGDGFGSPLTSNDVREILKITGSQNQ
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
IKVVGGIKKLTQVIDLFDNGISCVGTSNFSEIFEEVKII
EEEHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
PNIEYELNKKIHAIIINPYLSWEDFSVNCDLIRKYNIKNISTSLNYLTDLKNCLDNYSA
CCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHCCC
DINALISYPLADLPVSFIEELVCFAKDKGAKGIEYIPNFINLSKKNLETFAAEIEQVKLS
CHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHC
GLPVSIIINKSKLQEEVFINAIEICLELGIKNFQFGDGFGSPLTSNDVREILKITGSQNQ
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
IKVVGGIKKLTQVIDLFDNGISCVGTSNFSEIFEEVKII
EEEHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA