| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is ypjH [H]
Identifier: 126695755
GI number: 126695755
Start: 362657
End: 363823
Strand: Reverse
Name: ypjH [H]
Synonym: P9301_04171
Alternate gene names: 126695755
Gene position: 363823-362657 (Counterclockwise)
Preceding gene: 126695756
Following gene: 126695744
Centisome position: 22.16
GC content: 33.08
Gene sequence:
>1167_bases GTGGTTCATATTGCCTGGTTAGGGAAAAAATCCCCTTTTTGTGGAAATGTAACTTACGGTAATTCAACTACTAAGGAATT AAAGGCCAGAGGGCATAAAATTAGTTTTATTCATTTCGACAATCCCTCTAGTTCAAATTCATCAAACCCATTATTTCTTG CAAATGATCCTGATGTAAGTCTCCCGTATTTAATTAAATCTCAAGTTTATACAATACCCTCGCCAAGGGCAGAAAAAGAG CTAAGGCTATCATTGGAAAGATTAAAACCTGACATAGTACATGCAAGCCTAACTTTATCTCCTTTAGACTTTAGACTTCC AGAGCTTTGTAATGAAATTAATGTTCCTCTTATAGGAACATTTCATCCACCATTTGATGCAAAAAATAGAAATCTAACTG CGAGCACTCAACAATTAACATATCAACTTTATGCTCCCTCTTTAGCAAAGTTCGATAAAATAATTATTTTTTCTGAACCT CAAAAAAATGTTCTTGAGAAATTAGGAGTACCTAAAGAAAAACAAATAATTATTCCAAACGGCGTTGATGAAAATATTTG GAAACCTTTTTACGAAAAAAGTAAAAAATATGCTCAAGTAAAAAACAAACTTGGAAACGAAAGAATCTTTTTATATATGG GAAGGATTGCAAATGAGAAAAATATTGAGGCACTTTTAAGATCTTGGCGCCAAACAAAAACTCATAATTGCAAATTAGTT ATTGTTGGTGATGGACCAATGAAGCCAACACTTCAAAATAGTTTTTCTAACCTGGGTAATGAGAAATTAATTTGGTGGGG TGCCGAATTAGATTTAGAAACTAGGATAGCAATAATGCAAATAGCAGAGGTGTTTTTCTTACCAAGCTTAGTAGAAGGTT TATCATTATCACTTTTAGAGGCAATGTCTGCTGGTACAGCTTGTGTAGCTACCGATGCCGGAGCTGATGGCGAAGTTTTA GATAAAGGAGCAGGAATAGTAATTTCAACTGATAATGTGGCTGCACAATTGAAAACTATAATCCCAATTCTTGTGGAACA TCCGTCATTTACAAAAGATCTTGGTGAAAAAGCTAGAGAACGAGTACTTGAGAGATATACAATTACTAAAAATATAAATT CACTTGAAAAAGTTTATACAAACTTAAAAGATAATTATAAAACCTAA
Upstream 100 bases:
>100_bases AGAAATATATAGTTAGCATTTTCATGAAGCATTAAAAATTTAAAAAATATGATCATGGCGCCTTTGCCTGTTAACTTAAT AAATAGTTAATTCAATTAGT
Downstream 100 bases:
>100_bases CGAAACTCTTTACTTCTATTACTAGCTGAAACTATTGATTCAATTAATGCTGACCTTACACTCTTTTTTTCTAAAACCCT TAAAGCAGAAATAGTTGTTC
Product: putative glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVSLPYLIKSQVYTIPSPRAEKE LRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGTFHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEP QKNVLEKLGVPKEKQIIIPNGVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLEAMSAGTACVATDAGADGEVL DKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARERVLERYTITKNINSLEKVYTNLKDNYKT
Sequences:
>Translated_388_residues MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVSLPYLIKSQVYTIPSPRAEKE LRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGTFHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEP QKNVLEKLGVPKEKQIIIPNGVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLEAMSAGTACVATDAGADGEVL DKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARERVLERYTITKNINSLEKVYTNLKDNYKT >Mature_388_residues MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVSLPYLIKSQVYTIPSPRAEKE LRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGTFHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEP QKNVLEKLGVPKEKQIIIPNGVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLEAMSAGTACVATDAGADGEVL DKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARERVLERYTITKNINSLEKVYTNLKDNYKT
Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR016040 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 43483; Mature: 43483
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVS CEEEEEECCCCCCCCCEECCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCC LPYLIKSQVYTIPSPRAEKELRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGT CCCEECCCEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEE FHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEPQKNVLEKLGVPKEKQIIIPN CCCCCCCCCCCCEEHHHHEEEEEECCCHHCCCEEEEEECCHHHHHHHCCCCCCCEEEECC GVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLE EECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSAGTACVATDAGADGEVLDKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARE HHCCCCEEEEECCCCCCCEEECCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RVLERYTITKNINSLEKVYTNLKDNYKT HHHHHHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVS CEEEEEECCCCCCCCCEECCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCC LPYLIKSQVYTIPSPRAEKELRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGT CCCEECCCEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEE FHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEPQKNVLEKLGVPKEKQIIIPN CCCCCCCCCCCCEEHHHHEEEEEECCCHHCCCEEEEEECCHHHHHHHCCCCCCCEEEECC GVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLE EECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSAGTACVATDAGADGEVLDKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARE HHCCCCEEEEECCCCCCCEEECCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RVLERYTITKNINSLEKVYTNLKDNYKT HHHHHHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]