| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is mltD [C]
Identifier: 126695695
GI number: 126695695
Start: 328890
End: 329651
Strand: Reverse
Name: mltD [C]
Synonym: P9301_03571
Alternate gene names: 126695695
Gene position: 329651-328890 (Counterclockwise)
Preceding gene: 126695696
Following gene: 126695694
Centisome position: 20.08
GC content: 22.97
Gene sequence:
>762_bases ATGAAATTTGCATTTTTAATTATTGCCATATTTATTAATTTTTTTAATCACTCATTGATAAAATCAGAAGACCAGATATT TTCAGCAAAAAATAAAATTGAGAATATTGCTAAAAAAGAATCAATTTCTGAAGAAGAAAATGAAATAAAAAAAATTCATG TTGTAAAAAGTGGAGATACATTATCAAGTATTTCAAAATTCTATTCAATAAATAAAGATTTAATTATTAAATTGAATAAC TTAAAAGATGAAAATTACATCTTTGTTGGCCAAAATCTTATTATCTCCGAATCTACTGAAAATCTTACAAAACAATCAGA TTTAATAAATAATTATCATATTGTTCAAATCGGTGAAAATCTTACTGAGATATCAAACAAATATGATTTAAAAGTAATAG ATCTTATAGAGCTTAATAATCTCAACAATCCTGATTCAATAAAGGTTGGTCAAAAGCTCATAATAATAAAAAAGAACACA AATAATTCAGAAAATTATAAAACAACCGAAAATAAAAAAAATAGTGAATATCTTGAGTCAGATAAAAAAATTTATGGTCC TATAATTACTCAAAGTAAATCATATAAAGATATAAAAGGTAGAAAAGTTTTAAACGTACTAAATCAAGAAAATAAAAAAC TGATTCTTTCAATCAATTGTGATGCCAATGAATTAGATGTAAGAATACCTGGCAGAAAATGGAGGGGAAGTAAGCCTGCT AAAGAAGAATTCGAAAATAATTTAATAAATGATTTTTGTTAA
Upstream 100 bases:
>100_bases ATTTTTAAAGTTTATTTTTCAGATTTAAATTACTTAAATTGTTTTCAAAAACCTAGCGATTTTAAATTTAAAGATTATCT TTAAATAAATAGTGAGTTTT
Downstream 100 bases:
>100_bases AACTTTTAATTAATATGTGTGAATAATTTGTCTAAGAATATTAATGATGAGCTATTCTACAAAAAGTTAAATTAATAGTA ATGGCAATTTCAAGAGGTGA
Product: LysM domain-containing protein
Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]
Alternate protein names: LysM Repeat-Containing Protein; LysM/M23/M37 Peptidase
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKFAFLIIAIFINFFNHSLIKSEDQIFSAKNKIENIAKKESISEEENEIKKIHVVKSGDTLSSISKFYSINKDLIIKLNN LKDENYIFVGQNLIISESTENLTKQSDLINNYHIVQIGENLTEISNKYDLKVIDLIELNNLNNPDSIKVGQKLIIIKKNT NNSENYKTTENKKNSEYLESDKKIYGPIITQSKSYKDIKGRKVLNVLNQENKKLILSINCDANELDVRIPGRKWRGSKPA KEEFENNLINDFC
Sequences:
>Translated_253_residues MKFAFLIIAIFINFFNHSLIKSEDQIFSAKNKIENIAKKESISEEENEIKKIHVVKSGDTLSSISKFYSINKDLIIKLNN LKDENYIFVGQNLIISESTENLTKQSDLINNYHIVQIGENLTEISNKYDLKVIDLIELNNLNNPDSIKVGQKLIIIKKNT NNSENYKTTENKKNSEYLESDKKIYGPIITQSKSYKDIKGRKVLNVLNQENKKLILSINCDANELDVRIPGRKWRGSKPA KEEFENNLINDFC >Mature_253_residues MKFAFLIIAIFINFFNHSLIKSEDQIFSAKNKIENIAKKESISEEENEIKKIHVVKSGDTLSSISKFYSINKDLIIKLNN LKDENYIFVGQNLIISESTENLTKQSDLINNYHIVQIGENLTEISNKYDLKVIDLIELNNLNNPDSIKVGQKLIIIKKNT NNSENYKTTENKKNSEYLESDKKIYGPIITQSKSYKDIKGRKVLNVLNQENKKLILSINCDANELDVRIPGRKWRGSKPA KEEFENNLINDFC
Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 29164; Mature: 29164
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAFLIIAIFINFFNHSLIKSEDQIFSAKNKIENIAKKESISEEENEIKKIHVVKSGDT CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEEECCCH LSSISKFYSINKDLIIKLNNLKDENYIFVGQNLIISESTENLTKQSDLINNYHIVQIGEN HHHHHHHHHCCCEEEEEEECCCCCCEEEECCEEEEECCHHHHHHHHHHHCCEEEEEECCC LTEISNKYDLKVIDLIELNNLNNPDSIKVGQKLIIIKKNTNNSENYKTTENKKNSEYLES HHHHCCCCCEEEEEEEEECCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHC DKKIYGPIITQSKSYKDIKGRKVLNVLNQENKKLILSINCDANELDVRIPGRKWRGSKPA CCCEECCEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCH KEEFENNLINDFC HHHHHHHHHHHCC >Mature Secondary Structure MKFAFLIIAIFINFFNHSLIKSEDQIFSAKNKIENIAKKESISEEENEIKKIHVVKSGDT CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEEECCCH LSSISKFYSINKDLIIKLNNLKDENYIFVGQNLIISESTENLTKQSDLINNYHIVQIGEN HHHHHHHHHCCCEEEEEEECCCCCCEEEECCEEEEECCHHHHHHHHHHHCCEEEEEECCC LTEISNKYDLKVIDLIELNNLNNPDSIKVGQKLIIIKKNTNNSENYKTTENKKNSEYLES HHHHCCCCCEEEEEEEEECCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHC DKKIYGPIITQSKSYKDIKGRKVLNVLNQENKKLILSINCDANELDVRIPGRKWRGSKPA CCCEECCEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCH KEEFENNLINDFC HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA