| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695691
Identifier: 126695691
GI number: 126695691
Start: 320549
End: 321988
Strand: Reverse
Name: 126695691
Synonym: P9301_03531
Alternate gene names: NA
Gene position: 321988-320549 (Counterclockwise)
Preceding gene: 126695692
Following gene: 126695688
Centisome position: 19.61
GC content: 35.69
Gene sequence:
>1440_bases ATGGCAGAGAGATTTAGTCAAAAAAATTTAAGAGTAAGACCAAGTTCTGATGAGGAGAAAATTGTAACAAATGCAAAAAA ACACTTCGAAAAGACTTTAGTTGAAATATCAGGTGAGTTAGTGGGAAGTGTTGCTGCACTGGAACACCCAACAAAAAATA AAAAGTTAAATTATGGAGAAATATTTTTAAGAGATAATGTTCCTGTAATGATTTATCTCATTACACAAAAGCGTTATGAA ATTGTCAAAAAATTCCTCAGTTTATGTCTAGAGTTACAAAGCACTAATTATCAAACACGTGGTGTATTTCCTACTAGTTT CGTTGAAGAAAATGGAAAGCTCATTGGAGACTATGGTCAAAGGTCAATCGGGAGGATTACTTCAGCAGATGCAAGTTTAT GGTGGCCCATTTTATGTTGGTATTATGTCAATAAAAGCGGCGATTATGCCTTCGGAAAAAGTCAAAGTGTTCAAAGAGGT ATTCAACTTCTACTAGATCTAGTTCTACATCCAACATTTGAGGGTACTCCAGTACTTTTTGTTCCAGATTGCGCATTTAT GATCGATAGACCTATGGATGTATGGGGGGCACCTTTAGAAGTTGAAGTTTTACTTCATGGATGTTTAAAAAGTTGCATAA ACCTTATGGAATTAAGTAGAGCAGATCATGTCAGTAGACTTTTAGACCAAAGACTAATTCTCACAAATCAATGGGTTAAA GATTTAGGAGGTTTTCTTTTAAAGCATTATTGGGTTACCAGCCAAACAATGCAAATTTTAAGAAGAAGGCCAACTGAGCA GTATGGAGATGATCAACACTTCAATGAATTTAACGTTCAACCTCAAGTAGTTCCATCATGGCTACAAGATTGGTTAGAGA ATAGAGGTGGCTACTTAATAGGAAATATTAGGACAGGAAGACCTGACTTTCGATTTTACAGTTTAGGTAATTCTCTAGCA TGTATGTTCGGAGTACTGCCTCCCGAGGAACAAAGAGCTTTATTTAGATTAGTTTTGCATAACAGACAGCATTTGATGGC TCAAATGCCCATGAGAATTTGTCATCCTCATATGGATGTTGAAGAATGGCAAAATAAAACCGGATCGGATCCAAAGAATT GGCCTTGGAGTTACCATAATGGTGGTCATTGGCCAAGTTTACTTTGGTTTTTTGGTGCAGCCGTTCTATTGCATCAAAAA AATTACGGTTCTGATGATGTGATTCTCATGGAAGAGATGAAATCTTTAATAGAAGAATCCTACTGGTGTCAACTTAATCA ATTGCCTAAGCAAGAATGGGCAGAATATTTTGATGGGCCTACAGGAACTTGGGTTGGACAACAATCAAGAACTTATCAAA CCTGGACAATAGTTGGATTTTTATTAATGAATCATTTTTTAAGGAATGATTATAACGATCTGGATATGTTTAAGATTTAA
Upstream 100 bases:
>100_bases CTGTAATTGTGCAACCTTTTATACAAAAATTTTTTATTAATTTTTTATTTGTTCAAAGTCTCCTTAAACAACTAGGCTTA AATAAAGGGATATAAATGAA
Downstream 100 bases:
>100_bases GCCTAAAATAATCCTAGTGTCAGTGATTTATCAATTGGCAAACATGCTCCAATACCAAGGTATATAGTTAAAAAAGTTCC GAACAAGAAAACGGACATTG
Product: putative neutral invertase-like protein
Products: NA
Alternate protein names: Neutral Invertase-Like Protein; Neutral Invertase Like Protein; Plant Neutral Invertase Superfamily; LIM17 Protein
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGEIFLRDNVPVMIYLITQKRYE IVKKFLSLCLELQSTNYQTRGVFPTSFVEENGKLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRG IQLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK DLGGFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGAAVLLHQK NYGSDDVILMEEMKSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNDYNDLDMFKI
Sequences:
>Translated_479_residues MAERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGEIFLRDNVPVMIYLITQKRYE IVKKFLSLCLELQSTNYQTRGVFPTSFVEENGKLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRG IQLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK DLGGFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGAAVLLHQK NYGSDDVILMEEMKSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNDYNDLDMFKI >Mature_478_residues AERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGEIFLRDNVPVMIYLITQKRYEI VKKFLSLCLELQSTNYQTRGVFPTSFVEENGKLIGDYGQRSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRGI QLLLDLVLHPTFEGTPVLFVPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVKD LGGFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLAC MFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDVEEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGAAVLLHQKN YGSDDVILMEEMKSLIEESYWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNDYNDLDMFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55856; Mature: 55725
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGE CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE IFLRDNVPVMIYLITQKRYEIVKKFLSLCLELQSTNYQTRGVFPTSFVEENGKLIGDYGQ EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHCCCCEEECCCC RSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRGIQLLLDLVLHPTFEGTPVLF HHHCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK ECCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGGFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDV EEEECCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGAAVLLHQKNYGSDDVILMEEMKSLIEES HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHH YWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNDYNDLDMFKI HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AERFSQKNLRVRPSSDEEKIVTNAKKHFEKTLVEISGELVGSVAALEHPTKNKKLNYGE CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE IFLRDNVPVMIYLITQKRYEIVKKFLSLCLELQSTNYQTRGVFPTSFVEENGKLIGDYGQ EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHCCCCEEECCCC RSIGRITSADASLWWPILCWYYVNKSGDYAFGKSQSVQRGIQLLLDLVLHPTFEGTPVLF HHHCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VPDCAFMIDRPMDVWGAPLEVEVLLHGCLKSCINLMELSRADHVSRLLDQRLILTNQWVK ECCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGGFLLKHYWVTSQTMQILRRRPTEQYGDDQHFNEFNVQPQVVPSWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACMFGVLPPEEQRALFRLVLHNRQHLMAQMPMRICHPHMDV EEEECCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCH EEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGAAVLLHQKNYGSDDVILMEEMKSLIEES HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHH YWCQLNQLPKQEWAEYFDGPTGTWVGQQSRTYQTWTIVGFLLMNHFLRNDYNDLDMFKI HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA