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The map label for this gene is cpeS [H]

Identifier: 126695669

GI number: 126695669

Start: 303832

End: 304380

Strand: Reverse

Name: cpeS [H]

Synonym: P9301_03311

Alternate gene names: 126695669

Gene position: 304380-303832 (Counterclockwise)

Preceding gene: 126695670

Following gene: 126695667

Centisome position: 18.54

GC content: 27.14

Gene sequence:

>549_bases
TTGACGAAGAATCTAACACTAATTAATCAATTCATTGATAAAAGTATAGGAGAGTGGAAATCTATTAGAAGTACTCACAC
TTTAGCTTTTCAGGAATTTGAAAACTCAACTAGCAAAATATTTATAAAACATATCAACAAAAAAAATAAAAAAGTCGTTG
AAATTTTTAAAAATTATAAATTTAGTTTAAGCCTAGATAGCATAGCCATTTCTATAAACTGGCAAGCTATTAGTGATTGG
GACAATGATGATATCAGTGAGGGAGATGAAACTATTCTGATTTTTTTACCCAAAGATGAAAATTCAGGAATTGTTTTAAG
AAATAAAGGTTATACAGAATCCTTTATTTCATCATCCAATTATTTTGTTGAACAAAATAATTTACACATTAAAACTATTT
ATAAATCGACAGTTTCCGAAGAAAGAATTTCCTTTTTATCCACTCATGTAAGATCCAGATTTTCTACTATTAGAAATCTA
GAAAATAACTCAGTTATACAGACGTCCCATACTTCTGAGATAAGGAATTTAGCTAGTTTAAAAGATTAA

Upstream 100 bases:

>100_bases
ACTCCTTCTGGATTAAAAGTAACTTCTGCAAAGAGATTAATGGTGGATTCAATGGTAAGAATGATACAAAAAGCAGAAAA
TCATTCCGTAGAAGATAAAC

Downstream 100 bases:

>100_bases
TTATCCTTTCAAATTGAAACTCTGTTTCAGATATTAATTTAGGAAGAAAGCCTTTGTTTCCGCGCATATTATTAACTGTT
GAATTCAAATCAGAGATAGT

Product: phycoerythrin linker protein CpeS-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTKNLTLINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIFIKHINKKNKKVVEIFKNYKFSLSLDSIAISINWQAISDW
DNDDISEGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFVEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNL
ENNSVIQTSHTSEIRNLASLKD

Sequences:

>Translated_182_residues
MTKNLTLINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIFIKHINKKNKKVVEIFKNYKFSLSLDSIAISINWQAISDW
DNDDISEGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFVEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNL
ENNSVIQTSHTSEIRNLASLKD
>Mature_181_residues
TKNLTLINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIFIKHINKKNKKVVEIFKNYKFSLSLDSIAISINWQAISDWD
NDDISEGDETILIFLPKDENSGIVLRNKGYTESFISSSNYFVEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNLE
NNSVIQTSHTSEIRNLASLKD

Specific function: Acts as a chromphore lyase, covalently attaching 3Z- phycoerythrobilin (3Z-PEB) to its target protein CpeB (phycoerythrin). Binds the isomeric chromophores 3E- phycoerythrobilin (3E-PEB), 3Z-PEB as well as their precursor 15,16-dihydrobiliverdin (DHBV) bu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 21060; Mature: 20929

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNLTLINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIFIKHINKKNKKVVEIFKNYK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCE
FSLSLDSIAISINWQAISDWDNDDISEGDETILIFLPKDENSGIVLRNKGYTESFISSSN
EEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHCCCC
YFVEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNLENNSVIQTSHTSEIRNLASL
EEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHC
KD
CC
>Mature Secondary Structure 
TKNLTLINQFIDKSIGEWKSIRSTHTLAFQEFENSTSKIFIKHINKKNKKVVEIFKNYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCE
FSLSLDSIAISINWQAISDWDNDDISEGDETILIFLPKDENSGIVLRNKGYTESFISSSN
EEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHCCCC
YFVEQNNLHIKTIYKSTVSEERISFLSTHVRSRFSTIRNLENNSVIQTSHTSEIRNLASL
EEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]