| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700952
Identifier: 126700952
GI number: 126700952
Start: 3896015
End: 3896260
Strand: Direct
Name: 126700952
Synonym: CD3333
Alternate gene names: NA
Gene position: 3896015-3896260 (Clockwise)
Preceding gene: 126700951
Following gene: 126700953
Centisome position: 90.81
GC content: 31.3
Gene sequence:
>246_bases ATGATGGGAGAATTTATTATCTATTATCGTGGAAAAATCGTTGGCGGTATATATGATGATAGGTTACTGGTAAAACCAAC AAAGTCTGCAATTTCTTATATGCCAACAGTTACTTATGAAATTCCATACGAAAATGCCAAAGAAATGTTATTGGTGGAAG AAATTGATAATAAAGATTTTCTGACGGGGTTATTTAATGTGATGTATGATGAACTACCAACGCCAAAACCTAAAAAGAAA AAATAA
Upstream 100 bases:
>100_bases ATCCTGATAAAGTAAGAAAAGAATTATCCGAAGCAATTGACACACTACTATTGGGAGCTAATCAAAAATATAAAGACTAC AAGAAATAACATATCGTGCA
Downstream 100 bases:
>100_bases ACAGTTCCTAACTTGACAATTTCATATCCATACATACAAAGCAGTTAGTCTTAGGATTGACTGCTTTTTTCTTACCAAAA TTATAGATTGGAGTAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: TfoX N- Domain Family Protein; TfoX Domain Protein; Regulator Of Competence-Specific Genes; TfoX N-Terminal Domain Family Protein; TfoX N-Terminal Domain-Containing Protein
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDFLTGLFNVMYDELPTPKPKKK K
Sequences:
>Translated_81_residues MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDFLTGLFNVMYDELPTPKPKKK K >Mature_81_residues MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDFLTGLFNVMYDELPTPKPKKK K
Specific function: Unknown
COG id: COG3070
COG function: function code K; Regulator of competence-specific genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9443; Mature: 9443
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDF CCCCEEEEECCEEECCCCCCEEEEEECHHHHHHCCEEEEECCCCCCCCEEEEEECCCCHH LTGLFNVMYDELPTPKPKKKK HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDF CCCCEEEEECCEEECCCCCCEEEEEECHHHHHHCCEEEEECCCCCCCCEEEEEECCCCHH LTGLFNVMYDELPTPKPKKKK HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA