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The map label for this gene is fdhF

Identifier: 126700937

GI number: 126700937

Start: 3882086

End: 3883813

Strand: Direct

Name: fdhF

Synonym: CD3317

Alternate gene names: NA

Gene position: 3882086-3883813 (Clockwise)

Preceding gene: 126700931

Following gene: 126700940

Centisome position: 90.49

GC content: 34.03

Gene sequence:

>2145_bases
ATGGAGAAAAAAATTTTAACAGTTTGTCCATACTGTGGAGCTGGATGCCAATTATATCTAGTAGTAAAAGATAATAAGAT
ATTAAGAGCTGAACCGGCTAATGGTAGAACAAATCAAGAAAGTTTGTGTTTAAAAGGTCGTTATGGATGGGATTTTCTAA
ATGACCCTAAAATTCTAACACCTAGGCTAAAAAAGCCAATGATAAGAAAACAAGGTGTACTAGAAGAGGTTGAATGGGAT
GAGGCTATAAACTATACAGCTTCAAGACTAAATGAAATTAAAGAAAAATATGGTCCTGATTCTATTATGGGAACAGGTTC
TGCAAGAGGACCTGGTAATGAAGCAAACTATATAATGCAAAAATTTATGAGAGCTACAATAGGAACTAATAATGTTGACC
ATTGTGCTCGTGTCTGACATGCACCATCTGTAGCCGGTCTGGCTTACTCATTAGGTAGTGGTGCAATGTCTAATTCTATA
CCAGAGATAGAAAATGCAGATGTTTTATTTATATTTGGATATAATGGAGCAGATTCACATCCAATAGTGGCAAATAGAAT
AGTAAAAGCTAAAAAAAATGGTGCTAAATTAATTGTTACTGACCCTAGAGTAACTGAATCTGCAAGAATTGCTGATATAC
ATCTACCTATAAAAGGTGGAACAAACATGGTTTTAGTAAATGCTTTTGGAAATGTATTAATAGAAGAAGGTCTTTACAAT
AAAGAATTTGTTCAAAATCATACACAAGGATTTGATGAGTATAAAGAAATTGTTAAACCATATACAGCTAAATATGCTGA
AAAGATTACAGGAATCCCAGAAGAGCTTATAAGAAAAGCTATGAGAGAATATGCAAAAGGTAAAAAAGCTATGATACTTT
ATGGAATGGGTGTCTGTCAATTTGGTCAAGCTGTTGATGTAGTTAAGGGACTTGCATCAATTGCTCTACTTACAGGTAAT
TTTGGTAGAGAAAGCGTTGGAATAGGACCTGTACGTGGACAAAATAATGTTCAAGGAGCTTGTGATATGGGAGCTCTTCC
TAATGTATATCCTGGCTATCAAAATGTAACTGATGATAAGATAAGAGAAAAGTTTGAAAAAGCTTGGGGGGTAAAATTAT
CTCCTAATAATGGTTATAGTTTAACTCAAGTTCCAAATTTAGTACTAAAAGAGAAAAAGCTTAAAGCTTATTATATATTT
GGAGAAGACCCAGTGCAAAGTGACCCAGATGCATCAGAAGTTAGAGAAGCATTAGATGAATTGGAATTTGTCATTGTTCA
AGATATATTTATGAATAAGACAGCACTTCACGCTGATGTTATACTTCCAGCTACTTCTTGGGGAGAACATGAGGGAGTAT
ATACATGTGCAGATAGAGGATTCCAATTGATGAGAAAAGCTATAGAGCCACAAGGAGATGTAAAACCAGACTGGCAAATT
ATAAGCGAAATTTCTACAGCAATGGGATATCCTATGAATTATAAAAATACTAAGGAAATATGGGACGAACTTAGACAATT
ATGTCCAAGTTTCTTAGGTGCTACTTATGAAAAGATAGAAACTCAAGGATGTGTTCAATGGCCTTGTAAGAGTGAAAGTA
TGGAAGATAAAGGGACTATGTATCTGTATGAAGGTCAAAAGTTTTCTACTCCTAATGGTAAAGGTAATTTGTTCGCTGCT
GAATGGAGACCACCTATGGAAGTTGAAGATGATGAATACCCATTTAGTTTATGTACTGTAAGAGAAGTTGGACACTATTC
AGTAAGAACAATGACTGGTAATTGTAGAACACTTAGTTCATTAGAAGATGAACCAGGACGTGTTCAAATAAATTCTAATG
ATGCTGAAAAATTAGGAATTGAAGATGATGAATTAGTTAGAATTAGTTCAAGAAGAGGAAGTGTAATAACAAGAGCAACA
GTTACTGATAGAGTTAAGGAAGGTGCAACATATATGACTTATCAGTGGTGGGTTGGAGCTTGCAATGAACTTACAATAGC
AAATTTAGACCCTATATCTAAAACACCAGAGTATAAATATTGTGCTGTTAAACTTGAAAAACTTGAAGACCAAGAATTAG
CAGAAAAATGTGTAAGAGAAGAGTATCAAAGTTTGAAAGACAAAATGACAGCTACAAATATCTAA

Upstream 100 bases:

>100_bases
TAGTATTGCAAAATATTTATGATTTTGCATATTATAAAAACACTCATTATCTTTAAGATAAATTTTACTTATCAGGGGAT
AAATCTAAGGGGGGAATTGT

Downstream 100 bases:

>100_bases
TGATTTATTAGATTTAAGATTTATAAAAGGCAGAAAGGCTAATATTTTATGAACAATATATACTCAAAAACTAAATTACA
AGAAAATAGTAAGGATAAAG

Product: formate dehydrogenase H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>713_residues
MEKKILTVCPYCGAGCQLYLVVKDNKILRAEPANGRTNQESLCLKGRYGWDFLNDPKILTPRLKKPMIRKQGVLEEVEWD
EAINYTASRLNEIKEKYGPDSIMGTGSARGPGNEANYIMQKFMRATIGTNNVDHCARVHAPSVAGLAYSLGSGAMSNSIP
EIENADVLFIFGYNGADSHPIVANRIVKAKKNGAKLIVTDPRVTESARIADIHLPIKGGTNMVLVNAFGNVLIEEGLYNK
EFVQNHTQGFDEYKEIVKPYTAKYAEKITGIPEELIRKAMREYAKGKKAMILYGMGVCQFGQAVDVVKGLASIALLTGNF
GRESVGIGPVRGQNNVQGACDMGALPNVYPGYQNVTDDKIREKFEKAWGVKLSPNNGYSLTQVPNLVLKEKKLKAYYIFG
EDPVQSDPDASEVREALDELEFVIVQDIFMNKTALHADVILPATSWGEHEGVYTCADRGFQLMRKAIEPQGDVKPDWQII
SEISTAMGYPMNYKNTKEIWDELRQLCPSFLGATYEKIETQGCVQWPCKSESMEDKGTMYLYEGQKFSTPNGKGNLFAAE
WRPPMEVEDDEYPFSLCTVREVGHYSVRTMTGNCRTLSSLEDEPGRVQINSNDAEKLGIEDDELVRISSRRGSVITRATV
TDRVKEGATYMTYQWWVGACNELTIANLDPISKTPEYKYCAVKLEKLEDQELAEKCVREEYQSLKDKMTATNI

Sequences:

>Translated_576_residues
LDICSCHFVFQTLILFSYTFFC*FLVFKFFKFNSTIFILWCFRYRV*ICYCKFIASSNPPLISHICCTFLNSISNCCSCY
YTSSS*TNSN*FIIFNS*FFSIIRIYLNTSWFIF**TKCSTITSHCSY*IVSNFSYST*TKWVFIIFNFHRWSPFSSEQI
TFTIRSRKLLTFIQIHSPFIFHTFTLTRPLNTSLSFYLFISST*ETWT*LSKFVPYFLSIFIIHRISHCCRNFAYNLPVW
FYISLWLYSFSHQLESSICTCIYSLMFSPRSSWKYNISVKCCLIHKYILNNDKFQFI*CFSNF*CIWVTLHWVFSKYIIS
FKLFLF*Y*IWNLS*TITIIRR*FYPPSFFKLFSYLIISYILIARIYIRKSSHITSSLNIILSTYRSYSNAFSTKITCK*
SN*CKSLNYINSLTKLTDTHSIKYHSFFTFCIFSHSFSYKLFWDSCNLFSIFSCIWFNNFFILIKSLCMILNKFFIVKTF
FY*YISKSIY*NHVCSTFYR*MYISNSCRFSYSRVSNN*FSTIFFSFYYSICHYWM*ICSIISKYK*NICIFYLWYRIRH
CTTT**VSQTGYRWCM
>Mature_576_residues
LDICSCHFVFQTLILFSYTFFC*FLVFKFFKFNSTIFILWCFRYRV*ICYCKFIASSNPPLISHICCTFLNSISNCCSCY
YTSSS*TNSN*FIIFNS*FFSIIRIYLNTSWFIF**TKCSTITSHCSY*IVSNFSYST*TKWVFIIFNFHRWSPFSSEQI
TFTIRSRKLLTFIQIHSPFIFHTFTLTRPLNTSLSFYLFISST*ETWT*LSKFVPYFLSIFIIHRISHCCRNFAYNLPVW
FYISLWLYSFSHQLESSICTCIYSLMFSPRSSWKYNISVKCCLIHKYILNNDKFQFI*CFSNF*CIWVTLHWVFSKYIIS
FKLFLF*Y*IWNLS*TITIIRR*FYPPSFFKLFSYLIISYILIARIYIRKSSHITSSLNIILSTYRSYSNAFSTKITCK*
SN*CKSLNYINSLTKLTDTHSIKYHSFFTFCIFSHSFSYKLFWDSCNLFSIFSCIWFNNFFILIKSLCMILNKFFIVKTF
FY*YISKSIY*NHVCSTFYR*MYISNSCRFSYSRVSNN*FSTIFFSFYYSICHYWM*ICSIISKYK*NICIFYLWYRIRH
CTTT**VSQTGYRWCM

Specific function: Unknown

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65717; Mature: 65717

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LDICSCHFVFQTLILFSYTFFCFLVFKFFKFNSTIFILWCFRYRVICYCKFIASSNPPLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCHH
SHICCTFLNSISNCCSCYYTSSSTNSNFIIFNSFFSIIRIYLNTSWFIFTKCSTITSHCS
HHHHHHHHHHHHHHHEEEEECCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
YIVSNFSYSTTKWVFIIFNFHRWSPFSSEQITFTIRSRKLLTFIQIHSPFIFHTFTLTRP
HHHHCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEEEECCC
LNTSLSFYLFISSTETWTLSKFVPYFLSIFIIHRISHCCRNFAYNLPVWFYISLWLYSFS
CCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HQLESSICTCIYSLMFSPRSSWKYNISVKCCLIHKYILNNDKFQFICFSNFCIWVTLHWV
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEHHHHCCCCEEEEEECCCCHHHHHHHH
FSKYIISFKLFLFYIWNLSTITIIRRFYPPSFFKLFSYLIISYILIARIYIRKSSHITSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LNIILSTYRSYSNAFSTKITCKSNCKSLNYINSLTKLTDTHSIKYHSFFTFCIFSHSFSY
HHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEE
KLFWDSCNLFSIFSCIWFNNFFILIKSLCMILNKFFIVKTFFYYISKSIYNHVCSTFYRM
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YISNSCRFSYSRVSNNFSTIFFSFYYSICHYWMICSIISKYKNICIFYLWYRIRHCTTTV
HHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQTGYRWCM
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA