| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is chrA [H]
Identifier: 126700921
GI number: 126700921
Start: 3866714
End: 3867226
Strand: Direct
Name: chrA [H]
Synonym: CD3302
Alternate gene names: 126700921
Gene position: 3866714-3867226 (Clockwise)
Preceding gene: 126700918
Following gene: 126700922
Centisome position: 90.13
GC content: 29.63
Gene sequence:
>513_bases ATGTTGAAATTGTTTTTAACCTTTTTAAAAATTGGTGCGTTTACATTTGGTGGTGGATACGCTATGGTTCCTCTTATACA AGATGAACTTGTAAACAAACAAAAACTTTTAGAGCAGGAAGAATTTATTGATTATTTATCCATAGCTCAAAGTTATCCTG GAGTACTGGCAGTTAATATATCTGTATTATTAGGATATAAACTTTATGGTATACCAGGAGTTCTTATATGTACCTTAGGC TCTGCTTTACCATCATTTTGTATAGTCTTAGTCTTATCGTATCTATACTTTAAAAATTCATCATCTAAAATTTTAGATGG ATTTTTTAAAGGAGTTGCGCCTGTTGTAATAGCTCTTATATTGTATTCTTTTACGAGCATGTTCAAGAAACTACCAAAGT CTAAAACTAACATACTACTATTAATTATAGCAGTTTTATCTGTTGGTGTATTCAATATAAGCCCTATTTATTTAATAATT GGAGGAGGTGTATATAGTCTATGTCAGAAATAA
Upstream 100 bases:
>100_bases TAAATTCTTAGAATACTATCATACTATATTATCTTTTTATTATGATATAATATTAATATTAGTATACTTAGATGTTATTT ATCTTTTGGAGGTTTCTATT
Downstream 100 bases:
>100_bases TACTACTCTTCTTAATATTCCTTAAAATAGGGGCATTTAGTTTTGGTGGCGGTTATGCCATGCTACCATTTATCCAGCAA GAATTTATATCTAAATATCA
Product: chromate transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYGIPGVLICTLG SALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLII GGGVYSLCQK
Sequences:
>Translated_170_residues MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYGIPGVLICTLG SALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLII GGGVYSLCQK >Mature_170_residues MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYGIPGVLICTLG SALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLII GGGVYSLCQK
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18580; Mature: 18580
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNI CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHH SVLLGYKLYGIPGVLICTLGSALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLIIGGGVYSLCQK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCC >Mature Secondary Structure MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNI CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHH SVLLGYKLYGIPGVLICTLGSALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLIIGGGVYSLCQK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]