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The map label for this gene is 126700788

Identifier: 126700788

GI number: 126700788

Start: 3701393

End: 3702331

Strand: Direct

Name: 126700788

Synonym: CD3169

Alternate gene names: NA

Gene position: 3701393-3702331 (Clockwise)

Preceding gene: 126700787

Following gene: 126700807

Centisome position: 86.27

GC content: 27.58

Gene sequence:

>939_bases
TTGGAAAATTTAATCCTATCAATAAATGTTGTTCTTCCTTTGTTTCTCACAATGTCACTTGGATATGTTCTAAAAAAATT
AGGTCTATTTGATACTCATACTTTAAATAAAATGAATAATGTCTGCTTCAAGTCTTTCTTGCCATTATTATTATTTTTTA
ATATATACAATACAGATTTAGATGGTTCTCTTAATTTTAGGCTTATGGCTGTAGCTGTTATAATTATTTTTTCAATCTTC
TTAATCTTAGTCTTTATTATTCCTAAAATTGAAAAAGATAATAAGACAAGGGGTGCATTAATACAAGGTGTATTTCGTAG
CAATTTCGTTATATTTGGTATTCCTGTGACAATTTCACTATTTGGCGATAAGAGTATTGGAGTCACATCTTTATTAATTG
CAGTTATTGTACCTATGTTTAATGTATTATCTGTTGTAATTCTTGAAATTTTTAGAGGTGGCAAAGTAAATATAAAACAT
ATGATTAAAAGCGTCTTAACAAATCCACTCATAATCGCCTCTTTTATAGGATTGACAATGCTAATTTTAAATATTAATAT
ACCTACATTTTTACACAAAACTATTGGTGATATTTCTAAAATAGCTACTCCTTTATCACTTATAATTCTAGGTGGCTCTT
TTAGTTTTTCTGCTATAAAGGGGCATATAAAACCCATTATATTGGGCGTATGTGGAAAACTTATACTTGTACCTGCTATA
TTTTTACCAATTAGCATTTTTCTTGGATTTAGAAATGTAGAATTAGCTTCACTTATGATAATGTTATCTGCTCCAACTGC
AGTTTCTTCATTTACAATGGCACAACAGATGGATTCTGACAGTGAATTAGCTGGACAAATTGTAGTATTTACTTCTGGAT
TTTCTATAATTACAGTATTTTTAATAATATTTATTTTAAAGCAGAATAATCTTATTTAA

Upstream 100 bases:

>100_bases
AATGTACAGGTGTCTTTGGTAATATAAAATCTATTTATTTGAAAAAAACTAATGGAAATTTAATTGAATTATCAAATCAT
AGAATCACGGAGAGTAAACC

Downstream 100 bases:

>100_bases
TGATATTTGATAACACAAATTGGTATTATAAGAAACATATATAAAACTGATTTAATCGCGTAAAAACATATTATTATACT
ATTTTTACTATATAATATAA

Product: transporter

Products: NA

Alternate protein names: Permease; Malonate Transporter; Transporter AEC Family; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Membrane Transport Protein Family Transporter; AEC Family Transporter; Membrane Transporter; Transporter Auxin Efflux Carrier Family Protein; Efflux Protein; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; MdcF Malonate Transporter; Membrane Transport Protein Auxin Efflux; Membrane Transport Protein Auxin Efflux Carrier; Auxin Efflux Carrier Protein; Transmembrane Permease Protein; Permease Transmembrane Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MENLILSINVVLPLFLTMSLGYVLKKLGLFDTHTLNKMNNVCFKSFLPLLLFFNIYNTDLDGSLNFRLMAVAVIIIFSIF
LILVFIIPKIEKDNKTRGALIQGVFRSNFVIFGIPVTISLFGDKSIGVTSLLIAVIVPMFNVLSVVILEIFRGGKVNIKH
MIKSVLTNPLIIASFIGLTMLILNINIPTFLHKTIGDISKIATPLSLIILGGSFSFSAIKGHIKPIILGVCGKLILVPAI
FLPISIFLGFRNVELASLMIMLSAPTAVSSFTMAQQMDSDSELAGQIVVFTSGFSIITVFLIIFILKQNNLI

Sequences:

>Translated_312_residues
MENLILSINVVLPLFLTMSLGYVLKKLGLFDTHTLNKMNNVCFKSFLPLLLFFNIYNTDLDGSLNFRLMAVAVIIIFSIF
LILVFIIPKIEKDNKTRGALIQGVFRSNFVIFGIPVTISLFGDKSIGVTSLLIAVIVPMFNVLSVVILEIFRGGKVNIKH
MIKSVLTNPLIIASFIGLTMLILNINIPTFLHKTIGDISKIATPLSLIILGGSFSFSAIKGHIKPIILGVCGKLILVPAI
FLPISIFLGFRNVELASLMIMLSAPTAVSSFTMAQQMDSDSELAGQIVVFTSGFSIITVFLIIFILKQNNLI
>Mature_312_residues
MENLILSINVVLPLFLTMSLGYVLKKLGLFDTHTLNKMNNVCFKSFLPLLLFFNIYNTDLDGSLNFRLMAVAVIIIFSIF
LILVFIIPKIEKDNKTRGALIQGVFRSNFVIFGIPVTISLFGDKSIGVTSLLIAVIVPMFNVLSVVILEIFRGGKVNIKH
MIKSVLTNPLIIASFIGLTMLILNINIPTFLHKTIGDISKIATPLSLIILGGSFSFSAIKGHIKPIILGVCGKLILVPAI
FLPISIFLGFRNVELASLMIMLSAPTAVSSFTMAQQMDSDSELAGQIVVFTSGFSIITVFLIIFILKQNNLI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34225; Mature: 34225

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLILSINVVLPLFLTMSLGYVLKKLGLFDTHTLNKMNNVCFKSFLPLLLFFNIYNTDL
CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGSLNFRLMAVAVIIIFSIFLILVFIIPKIEKDNKTRGALIQGVFRSNFVIFGIPVTISL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEEE
FGDKSIGVTSLLIAVIVPMFNVLSVVILEIFRGGKVNIKHMIKSVLTNPLIIASFIGLTM
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
LILNINIPTFLHKTIGDISKIATPLSLIILGGSFSFSAIKGHIKPIILGVCGKLILVPAI
HHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLPISIFLGFRNVELASLMIMLSAPTAVSSFTMAQQMDSDSELAGQIVVFTSGFSIITVF
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCEEEEEECCHHHHHHH
LIIFILKQNNLI
HHHHHHHCCCCC
>Mature Secondary Structure
MENLILSINVVLPLFLTMSLGYVLKKLGLFDTHTLNKMNNVCFKSFLPLLLFFNIYNTDL
CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGSLNFRLMAVAVIIIFSIFLILVFIIPKIEKDNKTRGALIQGVFRSNFVIFGIPVTISL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEEE
FGDKSIGVTSLLIAVIVPMFNVLSVVILEIFRGGKVNIKHMIKSVLTNPLIIASFIGLTM
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
LILNINIPTFLHKTIGDISKIATPLSLIILGGSFSFSAIKGHIKPIILGVCGKLILVPAI
HHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLPISIFLGFRNVELASLMIMLSAPTAVSSFTMAQQMDSDSELAGQIVVFTSGFSIITVF
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCEEEEEECCHHHHHHH
LIIFILKQNNLI
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA