Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700765

Identifier: 126700765

GI number: 126700765

Start: 3672294

End: 3674912

Strand: Direct

Name: 126700765

Synonym: CD3148

Alternate gene names: NA

Gene position: 3672294-3674912 (Clockwise)

Preceding gene: 126700763

Following gene: 126700766

Centisome position: 85.6

GC content: 23.6

Gene sequence:

>2619_bases
ATGTTAACTACAAATATCCATTATATTCTTGATAATGATATATGTGAAATTTATTTTAATAAACAAAGGCTAACAAATTC
TAAGTATTATCAAGATAATATTAATGTATTAAATTATATTATAAATGAAAAAAATAATAACTTAATTATCAATTATAATG
ACAAATACATATATGCTATTTATTTGTTGAATATAGCTATAAACTCATACTTAAATAATACATTAAACCCAAATAATCAC
ATTCTTACAAAACTCGATAAAGGTATGCCCCTGCTCTACAAGGGTCAAATAGTTATATTTAAAAATATAAATAATACACA
CATAACTTTAGGACATAAAAATAAAACGGATACAACACTTATACCTATTGACTCGGCTTATATGCTTATAACCTATAATG
GTCATTTAGAAGTCAATTCTATGGGCAAAACTCCAGCATCTAAGACTTTTCAAACAAAGAATGTTCTATCATCTTTAGGT
TTTTCAGACTTAAAAAATATGACTGGAGTAATAAATGATTCTACACTGATTATATTGCCTTGTAAAGATGATATATCTGA
CTTAGTTAGTAATATTAAAATAAAAGATATTAATAATACTTATAAGTTTACTGAACTATTTCCATGTTCATATATTTCAT
CAACTGGTGCCGAAACTGATTATCCTGGAAATCACGCTAAGCAAATACCTTTACTTAAATTTACAACTAATATTTCTAGT
GCATTTGAAATTATTAAATCTGATAAGTCTATAAAAAATGTATTTATAATAGGTGATTATCCAATTTATAAGCATATAAA
TGATTTTGAAAGAATTTTAAATAGAAAAAGGATAGAAAGTGTAAATATTGTAACCTCAAATTCAAATATAAGCAATATAT
TAGATTTACCAAATATAGATAATCTAAATATATACTCTTGGTCTAAAGATGTTCTGTTAACCTATAGCCAAGATTTTGAA
AATACCTCTACTTTTCAGAAATTATGGCTAGATAAACTTATAAATAAAAATATATGTACTACTTCTGTTGATTCTAATAT
CTCTGACTTGATACATCAGGCTAGAAAATCACTTTATTACATATCTAAGTATGATTTTGATATTTCCATAAAAAACTCAC
TTATGATGTGTAGTTACTCTCTTCTTAAAATCTTAGAAAATACACCTTTTAACCTAGATTTTTTAGAAGAAACTATAAAG
CTTTTAAATTTAAATATAGCAACTCCTTCAGCGAAGCTAGAAAATATAAAATATTTAATTTCAAGTACTAGCCCAGATTT
AGAATTAAGTGCATTATTTGATGATGTTATAGTCAAATTTGAAAGAATTATAAATGAATTATCTGATAATAATACCAAAT
TCAATACACTAAATAAATTAGTATCTTCATATAAATACAAAACATTTACACCAAATACACCTGTTATATTGCTACAAAAA
CAATATGAAGCTATTATACTTAAAAATTTATTAAAATCTAGAAATATAAATTTACAAGTTATTTCTGCTGAAAAATTTAA
AGATTCAAAAACAATAAAAAATCTTATTATGTTTGGATTCTATGATTTGAAATATTTAGATATTTTAAATAGTGATTTGA
TTATAAATATTACACTGTATTTATATAATAGTGAATTATCCAAATATAATTACTATATGAATCAAATAAATTCTGCAAGA
AATAAAATTGAAAAAAATAATAAAATATATAACTTACTTGATATAAAACCTTTTAAACCAACTTATGAAACCAATAAATT
AGAAGCTTATTCTACCGATAGTCCTATTTCTGATGATGATTCTATGGATGAATATATATCTAATTATAAATTTGATATAA
ATTTAAATGAAATTATATTATCTCTATCTATAAATCAAGGGATTTACAACTCTAAAAAAGAACATGTTACATCATTCATG
ATTTCTGATAATAATGAGTATATATTCTGTACAAAAAAGGCAATAGCCTATTCAATAGATTGGGATAAAAAAAGTGTTAG
GAAAAAGAAACTTTCAGAGGCTAAAGTTAATGACTGGTTTTTATTTGTTGATGATTACTTAAATGAAGAGGGTGAATTAG
TTATTAATGTTATACAAAAGCTATTAGAACTTAATTTATTGCCATCTCATTATCTTGATGATTATAAATTAACTAATTCA
TGGAAATCAGAACTTAAAAACTATATATCTTATAGTAAATATAATTATAATGATGTATCAAACAGTTTAGCTGTTTTAGG
TGAAAAGATTAATCCTATAACAATCAAAAACTGGGTAACAAATAAAAGATTAATAGGTCCTATATATTTAAAAACTTTCG
AAAAGATATTTAAAGTTATAGATTCTAAATTAGATCATACCGAGGTATATGATGCTACTAAAAGTATACGCTCTTTGCAC
ACTAAAATAAAAAAATCTATAGATACATTTGTATCTGATAATTTCTTTAGCAGTAAATCAGATATAATTAAAGATGAAGT
GTCTGCAGTTGTTTTAAGTATGCTTGGGAATACAAATGATTATGTTACACCTGTACAAATACGAGAAATACACAGTTGTG
ATAAGTATCTGTCACCCCACCTTGTTAACAAAGTTTTAGACTTATATAGTGTTTATTAA

Upstream 100 bases:

>100_bases
TTTTTATATTATATACCATATATTATTTTTTAGTAATATAATTATAATATAGAATAAAAACTATTCTAATAAACAATAGT
AACTACTAAAGGAGATTTAA

Downstream 100 bases:

>100_bases
ATAAATAGGAGGTAAATATGAATTGTAGTGAACTAAGAGATAAAACCCTAGATCTTGTAAGAAAAGAACTTCTTGGACCT
GGTTCGGAAGATCTTTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 872; Mature: 872

Protein sequence:

>872_residues
MLTTNIHYILDNDICEIYFNKQRLTNSKYYQDNINVLNYIINEKNNNLIINYNDKYIYAIYLLNIAINSYLNNTLNPNNH
ILTKLDKGMPLLYKGQIVIFKNINNTHITLGHKNKTDTTLIPIDSAYMLITYNGHLEVNSMGKTPASKTFQTKNVLSSLG
FSDLKNMTGVINDSTLIILPCKDDISDLVSNIKIKDINNTYKFTELFPCSYISSTGAETDYPGNHAKQIPLLKFTTNISS
AFEIIKSDKSIKNVFIIGDYPIYKHINDFERILNRKRIESVNIVTSNSNISNILDLPNIDNLNIYSWSKDVLLTYSQDFE
NTSTFQKLWLDKLINKNICTTSVDSNISDLIHQARKSLYYISKYDFDISIKNSLMMCSYSLLKILENTPFNLDFLEETIK
LLNLNIATPSAKLENIKYLISSTSPDLELSALFDDVIVKFERIINELSDNNTKFNTLNKLVSSYKYKTFTPNTPVILLQK
QYEAIILKNLLKSRNINLQVISAEKFKDSKTIKNLIMFGFYDLKYLDILNSDLIINITLYLYNSELSKYNYYMNQINSAR
NKIEKNNKIYNLLDIKPFKPTYETNKLEAYSTDSPISDDDSMDEYISNYKFDINLNEIILSLSINQGIYNSKKEHVTSFM
ISDNNEYIFCTKKAIAYSIDWDKKSVRKKKLSEAKVNDWFLFVDDYLNEEGELVINVIQKLLELNLLPSHYLDDYKLTNS
WKSELKNYISYSKYNYNDVSNSLAVLGEKINPITIKNWVTNKRLIGPIYLKTFEKIFKVIDSKLDHTEVYDATKSIRSLH
TKIKKSIDTFVSDNFFSSKSDIIKDEVSAVVLSMLGNTNDYVTPVQIREIHSCDKYLSPHLVNKVLDLYSVY

Sequences:

>Translated_872_residues
MLTTNIHYILDNDICEIYFNKQRLTNSKYYQDNINVLNYIINEKNNNLIINYNDKYIYAIYLLNIAINSYLNNTLNPNNH
ILTKLDKGMPLLYKGQIVIFKNINNTHITLGHKNKTDTTLIPIDSAYMLITYNGHLEVNSMGKTPASKTFQTKNVLSSLG
FSDLKNMTGVINDSTLIILPCKDDISDLVSNIKIKDINNTYKFTELFPCSYISSTGAETDYPGNHAKQIPLLKFTTNISS
AFEIIKSDKSIKNVFIIGDYPIYKHINDFERILNRKRIESVNIVTSNSNISNILDLPNIDNLNIYSWSKDVLLTYSQDFE
NTSTFQKLWLDKLINKNICTTSVDSNISDLIHQARKSLYYISKYDFDISIKNSLMMCSYSLLKILENTPFNLDFLEETIK
LLNLNIATPSAKLENIKYLISSTSPDLELSALFDDVIVKFERIINELSDNNTKFNTLNKLVSSYKYKTFTPNTPVILLQK
QYEAIILKNLLKSRNINLQVISAEKFKDSKTIKNLIMFGFYDLKYLDILNSDLIINITLYLYNSELSKYNYYMNQINSAR
NKIEKNNKIYNLLDIKPFKPTYETNKLEAYSTDSPISDDDSMDEYISNYKFDINLNEIILSLSINQGIYNSKKEHVTSFM
ISDNNEYIFCTKKAIAYSIDWDKKSVRKKKLSEAKVNDWFLFVDDYLNEEGELVINVIQKLLELNLLPSHYLDDYKLTNS
WKSELKNYISYSKYNYNDVSNSLAVLGEKINPITIKNWVTNKRLIGPIYLKTFEKIFKVIDSKLDHTEVYDATKSIRSLH
TKIKKSIDTFVSDNFFSSKSDIIKDEVSAVVLSMLGNTNDYVTPVQIREIHSCDKYLSPHLVNKVLDLYSVY
>Mature_872_residues
MLTTNIHYILDNDICEIYFNKQRLTNSKYYQDNINVLNYIINEKNNNLIINYNDKYIYAIYLLNIAINSYLNNTLNPNNH
ILTKLDKGMPLLYKGQIVIFKNINNTHITLGHKNKTDTTLIPIDSAYMLITYNGHLEVNSMGKTPASKTFQTKNVLSSLG
FSDLKNMTGVINDSTLIILPCKDDISDLVSNIKIKDINNTYKFTELFPCSYISSTGAETDYPGNHAKQIPLLKFTTNISS
AFEIIKSDKSIKNVFIIGDYPIYKHINDFERILNRKRIESVNIVTSNSNISNILDLPNIDNLNIYSWSKDVLLTYSQDFE
NTSTFQKLWLDKLINKNICTTSVDSNISDLIHQARKSLYYISKYDFDISIKNSLMMCSYSLLKILENTPFNLDFLEETIK
LLNLNIATPSAKLENIKYLISSTSPDLELSALFDDVIVKFERIINELSDNNTKFNTLNKLVSSYKYKTFTPNTPVILLQK
QYEAIILKNLLKSRNINLQVISAEKFKDSKTIKNLIMFGFYDLKYLDILNSDLIINITLYLYNSELSKYNYYMNQINSAR
NKIEKNNKIYNLLDIKPFKPTYETNKLEAYSTDSPISDDDSMDEYISNYKFDINLNEIILSLSINQGIYNSKKEHVTSFM
ISDNNEYIFCTKKAIAYSIDWDKKSVRKKKLSEAKVNDWFLFVDDYLNEEGELVINVIQKLLELNLLPSHYLDDYKLTNS
WKSELKNYISYSKYNYNDVSNSLAVLGEKINPITIKNWVTNKRLIGPIYLKTFEKIFKVIDSKLDHTEVYDATKSIRSLH
TKIKKSIDTFVSDNFFSSKSDIIKDEVSAVVLSMLGNTNDYVTPVQIREIHSCDKYLSPHLVNKVLDLYSVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100915; Mature: 100915

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTNIHYILDNDICEIYFNKQRLTNSKYYQDNINVLNYIINEKNNNLIINYNDKYIYAI
CCEEEEEEEECCCEEEEEECHHHCCCCCEECCCCCEEEEEEECCCCEEEEEECCCEEEEE
YLLNIAINSYLNNTLNPNNHILTKLDKGMPLLYKGQIVIFKNINNTHITLGHKNKTDTTL
EEHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECEEEEEEECCCCEEEECCCCCCCCEE
IPIDSAYMLITYNGHLEVNSMGKTPASKTFQTKNVLSSLGFSDLKNMTGVINDSTLIILP
EEECCEEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCEECCCEEEEEE
CKDDISDLVSNIKIKDINNTYKFTELFPCSYISSTGAETDYPGNHAKQIPLLKFTTNISS
CCCCHHHHHHCCEEEECCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHH
AFEIIKSDKSIKNVFIIGDYPIYKHINDFERILNRKRIESVNIVTSNSNISNILDLPNID
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCCCC
NLNIYSWSKDVLLTYSQDFENTSTFQKLWLDKLINKNICTTSVDSNISDLIHQARKSLYY
CCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCEEE
ISKYDFDISIKNSLMMCSYSLLKILENTPFNLDFLEETIKLLNLNIATPSAKLENIKYLI
EEEEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHEEE
SSTSPDLELSALFDDVIVKFERIINELSDNNTKFNTLNKLVSSYKYKTFTPNTPVILLQK
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCEEEEEC
QYEAIILKNLLKSRNINLQVISAEKFKDSKTIKNLIMFGFYDLKYLDILNSDLIINITLY
HHHHHHHHHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
LYNSELSKYNYYMNQINSARNKIEKNNKIYNLLDIKPFKPTYETNKLEAYSTDSPISDDD
EEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCC
SMDEYISNYKFDINLNEIILSLSINQGIYNSKKEHVTSFMISDNNEYIFCTKKAIAYSID
HHHHHHHCCEEEEEHHHEEEEEEECCCCCCCCHHHEEEEEEECCCCEEEEECCEEEEEEC
WDKKSVRKKKLSEAKVNDWFLFVDDYLNEEGELVINVIQKLLELNLLPSHYLDDYKLTNS
CCHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCHHHCCCCEEHHH
WKSELKNYISYSKYNYNDVSNSLAVLGEKINPITIKNWVTNKRLIGPIYLKTFEKIFKVI
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEECHHHHHHHHHHHHHH
DSKLDHTEVYDATKSIRSLHTKIKKSIDTFVSDNFFSSKSDIIKDEVSAVVLSMLGNTND
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
YVTPVQIREIHSCDKYLSPHLVNKVLDLYSVY
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTTNIHYILDNDICEIYFNKQRLTNSKYYQDNINVLNYIINEKNNNLIINYNDKYIYAI
CCEEEEEEEECCCEEEEEECHHHCCCCCEECCCCCEEEEEEECCCCEEEEEECCCEEEEE
YLLNIAINSYLNNTLNPNNHILTKLDKGMPLLYKGQIVIFKNINNTHITLGHKNKTDTTL
EEHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECEEEEEEECCCCEEEECCCCCCCCEE
IPIDSAYMLITYNGHLEVNSMGKTPASKTFQTKNVLSSLGFSDLKNMTGVINDSTLIILP
EEECCEEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCEECCCEEEEEE
CKDDISDLVSNIKIKDINNTYKFTELFPCSYISSTGAETDYPGNHAKQIPLLKFTTNISS
CCCCHHHHHHCCEEEECCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHH
AFEIIKSDKSIKNVFIIGDYPIYKHINDFERILNRKRIESVNIVTSNSNISNILDLPNID
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCCCC
NLNIYSWSKDVLLTYSQDFENTSTFQKLWLDKLINKNICTTSVDSNISDLIHQARKSLYY
CCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCEEE
ISKYDFDISIKNSLMMCSYSLLKILENTPFNLDFLEETIKLLNLNIATPSAKLENIKYLI
EEEEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHEEE
SSTSPDLELSALFDDVIVKFERIINELSDNNTKFNTLNKLVSSYKYKTFTPNTPVILLQK
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCEEEEEC
QYEAIILKNLLKSRNINLQVISAEKFKDSKTIKNLIMFGFYDLKYLDILNSDLIINITLY
HHHHHHHHHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
LYNSELSKYNYYMNQINSARNKIEKNNKIYNLLDIKPFKPTYETNKLEAYSTDSPISDDD
EEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCC
SMDEYISNYKFDINLNEIILSLSINQGIYNSKKEHVTSFMISDNNEYIFCTKKAIAYSID
HHHHHHHCCEEEEEHHHEEEEEEECCCCCCCCHHHEEEEEEECCCCEEEEECCEEEEEEC
WDKKSVRKKKLSEAKVNDWFLFVDDYLNEEGELVINVIQKLLELNLLPSHYLDDYKLTNS
CCHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCHHHCCCCEEHHH
WKSELKNYISYSKYNYNDVSNSLAVLGEKINPITIKNWVTNKRLIGPIYLKTFEKIFKVI
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEECHHHHHHHHHHHHHH
DSKLDHTEVYDATKSIRSLHTKIKKSIDTFVSDNFFSSKSDIIKDEVSAVVLSMLGNTND
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
YVTPVQIREIHSCDKYLSPHLVNKVLDLYSVY
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA