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The map label for this gene is yrhO [H]

Identifier: 126700652

GI number: 126700652

Start: 3524014

End: 3524766

Strand: Direct

Name: yrhO [H]

Synonym: CD3034

Alternate gene names: 126700652

Gene position: 3524014-3524766 (Clockwise)

Preceding gene: 126700650

Following gene: 126700653

Centisome position: 82.14

GC content: 23.24

Gene sequence:

>753_bases
ATGGATAATATAATTAATGAATTACAAAATATAGGATTTACTAAATACGAATCTCAAATATACATATCATTATTAAAGGA
AAGCCCTTTAACAGGATATGAAATAAGTAAATTATCAGGTGTACCACAATCAAAAGTCTATGAAAATATAACAAAGCTAT
TAAACAATAATATAATTATCAATGTTGGAACTGACCCTATTAAGTACATACCAATAAACCCTAATGAATTATTAAAAAAT
AAGAAAAAAGAATTTGACAATTCTATGGATAATCTAAAGAATAGCTTACAGATATTAAATAAAAGTAAAAGTGTAGAATA
CGTATTAAACATAAAAGGAGATAAAAATATATTAAAAAAAGCAATAGAAATGATAAAAAATGCGAAACAAGAAATTATAA
TTTCTTGCCCTTATGAAGAAATTCTTGAATTAAAAAAAGAACTCCTAATTGCTTACAAAAAAAATATTAATATTGAAATA
CTACTTTTAGAAAACAAAAGTCTGAAAGGTCTTGATAATATTCATATTCATGGAGGTAATAAAACTACACTTGAAAATAA
AATGCTTTACAAAGGAATTATTTTGATTGTAGATAATGATGAAATATTGACAGGAAACTTATCAGAAGGCAGTGAGGCCA
TTTCAATTTGGACAAAAAACTCTAACATTTTATATATTGGAGTTCAATACATAAAACATGAAATTTATATTTCAGAACAA
ATAAAAGGAGGTTATAAAAATGAACAAAATTAA

Upstream 100 bases:

>100_bases
ATTTTTTTCTTAATATAGTTGACATTTTTTCCCTTAAATTATAAAATCAAATTAATAACTACATAGGTAGTTACTAATCT
TTTATCAAAGGAGTTTCTAT

Downstream 100 bases:

>100_bases
GATTAAACAAGTTGATGCTTTTACAACTATACCTTTTGGTGGAAATCCTGCTGGTGTCGTTACTGATGCCTCTAACATTT
CTGATGAAATTAAGCAGAAT

Product: sugar-specific transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDNIINELQNIGFTKYESQIYISLLKESPLTGYEISKLSGVPQSKVYENITKLLNNNIIINVGTDPIKYIPINPNELLKN
KKKEFDNSMDNLKNSLQILNKSKSVEYVLNIKGDKNILKKAIEMIKNAKQEIIISCPYEEILELKKELLIAYKKNINIEI
LLLENKSLKGLDNIHIHGGNKTTLENKMLYKGIILIVDNDEILTGNLSEGSEAISIWTKNSNILYIGVQYIKHEIYISEQ
IKGGYKNEQN

Sequences:

>Translated_250_residues
MDNIINELQNIGFTKYESQIYISLLKESPLTGYEISKLSGVPQSKVYENITKLLNNNIIINVGTDPIKYIPINPNELLKN
KKKEFDNSMDNLKNSLQILNKSKSVEYVLNIKGDKNILKKAIEMIKNAKQEIIISCPYEEILELKKELLIAYKKNINIEI
LLLENKSLKGLDNIHIHGGNKTTLENKMLYKGIILIVDNDEILTGNLSEGSEAISIWTKNSNILYIGVQYIKHEIYISEQ
IKGGYKNEQN
>Mature_250_residues
MDNIINELQNIGFTKYESQIYISLLKESPLTGYEISKLSGVPQSKVYENITKLLNNNIIINVGTDPIKYIPINPNELLKN
KKKEFDNSMDNLKNSLQILNKSKSVEYVLNIKGDKNILKKAIEMIKNAKQEIIISCPYEEILELKKELLIAYKKNINIEI
LLLENKSLKGLDNIHIHGGNKTTLENKMLYKGIILIVDNDEILTGNLSEGSEAISIWTKNSNILYIGVQYIKHEIYISEQ
IKGGYKNEQN

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 28557; Mature: 28557

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNIINELQNIGFTKYESQIYISLLKESPLTGYEISKLSGVPQSKVYENITKLLNNNIII
CCHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEE
NVGTDPIKYIPINPNELLKNKKKEFDNSMDNLKNSLQILNKSKSVEYVLNIKGDKNILKK
EECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
AIEMIKNAKQEIIISCPYEEILELKKELLIAYKKNINIEILLLENKSLKGLDNIHIHGGN
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCC
KTTLENKMLYKGIILIVDNDEILTGNLSEGSEAISIWTKNSNILYIGVQYIKHEIYISEQ
CCCHHCEEEEEEEEEEECCCEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHEEEEEEHH
IKGGYKNEQN
HCCCCCCCCC
>Mature Secondary Structure
MDNIINELQNIGFTKYESQIYISLLKESPLTGYEISKLSGVPQSKVYENITKLLNNNIII
CCHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEE
NVGTDPIKYIPINPNELLKNKKKEFDNSMDNLKNSLQILNKSKSVEYVLNIKGDKNILKK
EECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
AIEMIKNAKQEIIISCPYEEILELKKELLIAYKKNINIEILLLENKSLKGLDNIHIHGGN
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCC
KTTLENKMLYKGIILIVDNDEILTGNLSEGSEAISIWTKNSNILYIGVQYIKHEIYISEQ
CCCHHCEEEEEEEEEEECCCEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHEEEEEEHH
IKGGYKNEQN
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]