| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700593
Identifier: 126700593
GI number: 126700593
Start: 3453760
End: 3454539
Strand: Direct
Name: 126700593
Synonym: CD2972
Alternate gene names: NA
Gene position: 3453760-3454539 (Clockwise)
Preceding gene: 126700587
Following gene: 126700617
Centisome position: 80.5
GC content: 24.1
Gene sequence:
>780_bases ATGAAAGTTAATGAAAATAATATAAATAATATAGATGAAGAGTTAGATGAACTTAGTAGGAAAGTTTACTTAGAGTCACC AGATTTTTGGATAAGTATTTCTGACAAAATAATAGATAAAGTATTTGATGAAATGTTATTATTTTTTGCAGTTAAATATA ACTATTTCAATATAGTATGCTTTGCTATTGAAAACAATTATCTGGATTTAAACATGCCTTCAAAAAACAAAAAATACACT AATATAATGGAGCATTTGTTAGATACATCAAAACAGAATGAAGATAAAAAAATTTATAATTATCTTCTAAGCTTAAATAA AGGTAATAACCTAGATGAAAGACCAATTTTAGATGAATTAAACTGTAATATTAGTAGTGATACTTTTGAAAAAAAAGATA TATATCTTCCAAAGTACTTATGTCCAAGTTGTAATTCTAATATATTTGATACAGGTTATAAAGTATCAAATGACATAACA TATAAATTTTCTTCTAAAGAAGCTGAACCTATTGAAATGTGTAGTGAAGTTTCTTCTATCAGATGTTGTAATTGTGATGA ATTATTAGAAGATATTACACTTGATAAACTATATAACCTATGCAAAATTCAAAACTGTAATAATTGTGGTTCTAATTTAA CTAAGGTAGGAATTATTGCAAAGAAAAAAATGAACTTTGATGAGAATACTGAAAAATTTAAAGATGTCTCAACATCTTAC TGTTGTGGAAATTGTGACTCTGAAATAAACTTATCTCAAAGAGAACATTTTAAGATTTAA
Upstream 100 bases:
>100_bases TGTAAATTATAATATGATATATTTTTATATAAGATTTTATTTTATATAAAAAATAGTAACAAATAGTTTATACACAAGAT ATTTAAAAGGAAGTGATGAT
Downstream 100 bases:
>100_bases ATATTTATAGGCTAAAGTAATAAGATTACATTATTAGATACTGTATAAGTTTTTTAAATCTGTAAAAATAAATACACTTA TAAGAATTAAAATTGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYT NIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDIT YKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY CCGNCDSEINLSQREHFKI
Sequences:
>Translated_259_residues MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYT NIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDIT YKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY CCGNCDSEINLSQREHFKI >Mature_259_residues MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYT NIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDIT YKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY CCGNCDSEINLSQREHFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30164; Mature: 30164
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVC CCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEE FAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDEL EEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH NCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSI CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHC RCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHCCCHH CCGNCDSEINLSQREHFKI CCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVC CCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEE FAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDEL EEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH NCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSI CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHC RCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHCCCHH CCGNCDSEINLSQREHFKI CCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA