| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ordL [H]
Identifier: 126700484
GI number: 126700484
Start: 3354047
End: 3355270
Strand: Direct
Name: ordL [H]
Synonym: CD2868
Alternate gene names: 126700484
Gene position: 3354047-3355270 (Clockwise)
Preceding gene: 126700461
Following gene: 126700485
Centisome position: 78.18
GC content: 28.43
Gene sequence:
>1224_bases GTGAAGTATATGAATCAAGAATATGTAAAAGGAAATCCTATTTTTACTAATATTAATAAAGTTCCAAGACAATTTCCATA CCTTACTGATGATATTGATACTGATGTTATAATTGTTGGTGGTGGCGTAACTGGATGTATTTGTGCTTACTATCTAGCTA AAAACAATATAAAGTCTGTCATTCTTGAAAAAGGAAGGATTGCACATGGAAGCACTAGCGTGACAACTTCTCTATTACAG TATGAATTAGATGACAATTTGATAGATTTAACAGAGGTTATGACTCTAAAAGATGCTCTAAAAGCATATAACCTTTGTAC TTCAGCACTTGAAGAATTAGATACATTTATAGAGCTATATGGAAATAAGTGTGATTATGCCAAAAGAGATACTCTACTTT ATACTGCCAACAAACTTGAAGTTAAGGCTATCAAAGAAGAATATAACTTAAGAAAAGAAAATGGATTTGATGTTGAATAT ATTGATGAATCCACAAACCCTTTTAGCTTTGATTTAAAATCAGGATTGATAGCAAAGAATGGAGGACGAGAATTAGACCC ATATAAATATAGTCACCATTTGATTGATGTAAGTTTAAAAAATGGTCTTCAAGTATATGAAAATACAGAAGTAAAAAAAG TAGATTTATCAAATGATAAGGTTACTGCTGAAGTATCGTATGGACACAAAGTTCATGGTAAAAAATTAATTGTAGCTACA GGGTACAATACAAGTTTATTTACAAAAAGAAATTTTGCAACTAAGTCAAATACTTTTAATATAGCAACGAAACCACTTAA AAACATAGCTTCTTGGAAAAACAACATTTTAATTAGAGATAACTGTGACCCATATAATTATCTAAGAACTACTAAAGACA ATCGATTAATTATAGGTGGTGAAGATGTAAGTTTTGATGATATAGAAAATGAAACTTTAGCCAATGAAAAGTACGATATT TTAGAACAAAGATTGAAAAGCATGTTTAAGGATATAAAAGACATTGAAGTTGAATATAAATATTGTGGTTGTTTTGCTTC AACTTTAGATAATTTAGGTTTTATTGGTCCAGATAATAAAAATAACAATCTATGGTATTGCTTAGGTTATGGAGCAAATG GTATACTCTTTGCAATATTAGGAGGTATAATGTTAAGTGAATTATATCTTGGCAAACAAAATAAAAATATGAAATTATTT AAAGTAGATAGATTTGATAAATAG
Upstream 100 bases:
>100_bases ATCACATTTTATCTATACATACCCATATAACTAGATAATTAAAATGTATAATATTATTTGCTATAGAAAATAATACACTC ATACATAATAAATTTTAGGA
Downstream 100 bases:
>100_bases ATATTATATATTAAAAGACTGTAAAAAGGTGAAACTTTATAATTCTAAAAGTTAACTTTGATACAGTCTTTTATAATGTT CCTTTTAAAAATACTTTATT
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKYMNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSVILEKGRIAHGSTSVTTSLLQ YELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIELYGNKCDYAKRDTLLYTANKLEVKAIKEEYNLRKENGFDVEY IDESTNPFSFDLKSGLIAKNGGRELDPYKYSHHLIDVSLKNGLQVYENTEVKKVDLSNDKVTAEVSYGHKVHGKKLIVAT GYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCDPYNYLRTTKDNRLIIGGEDVSFDDIENETLANEKYDI LEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLGFIGPDNKNNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLF KVDRFDK
Sequences:
>Translated_407_residues MKYMNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSVILEKGRIAHGSTSVTTSLLQ YELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIELYGNKCDYAKRDTLLYTANKLEVKAIKEEYNLRKENGFDVEY IDESTNPFSFDLKSGLIAKNGGRELDPYKYSHHLIDVSLKNGLQVYENTEVKKVDLSNDKVTAEVSYGHKVHGKKLIVAT GYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCDPYNYLRTTKDNRLIIGGEDVSFDDIENETLANEKYDI LEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLGFIGPDNKNNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLF KVDRFDK >Mature_407_residues MKYMNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSVILEKGRIAHGSTSVTTSLLQ YELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIELYGNKCDYAKRDTLLYTANKLEVKAIKEEYNLRKENGFDVEY IDESTNPFSFDLKSGLIAKNGGRELDPYKYSHHLIDVSLKNGLQVYENTEVKKVDLSNDKVTAEVSYGHKVHGKKLIVAT GYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCDPYNYLRTTKDNRLIIGGEDVSFDDIENETLANEKYDI LEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLGFIGPDNKNNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLF KVDRFDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=386, Percent_Identity=24.8704663212435, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46289; Mature: 46289
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYMNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSV CCCCCCCCCCCCCEEECHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHH ILEKGRIAHGSTSVTTSLLQYELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIELY HHCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GNKCDYAKRDTLLYTANKLEVKAIKEEYNLRKENGFDVEYIDESTNPFSFDLKSGLIAKN CCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCEEEECCCCCCEEEECCCCEEECC GGRELDPYKYSHHLIDVSLKNGLQVYENTEVKKVDLSNDKVTAEVSYGHKVHGKKLIVAT CCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEECCCEEEEEE GYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCDPYNYLRTTKDNRLIIGG CCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCEEEECCCCHHHHHEECCCCEEEECC EDVSFDDIENETLANEKYDILEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLGFIGPDNK CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCCC NNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLFKVDRFDK CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC >Mature Secondary Structure MKYMNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSV CCCCCCCCCCCCCEEECHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHH ILEKGRIAHGSTSVTTSLLQYELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIELY HHCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GNKCDYAKRDTLLYTANKLEVKAIKEEYNLRKENGFDVEYIDESTNPFSFDLKSGLIAKN CCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCEEEECCCCCCEEEECCCCEEECC GGRELDPYKYSHHLIDVSLKNGLQVYENTEVKKVDLSNDKVTAEVSYGHKVHGKKLIVAT CCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEECCCEEEEEE GYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCDPYNYLRTTKDNRLIIGG CCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCEEEECCCCHHHHHEECCCCEEEECC EDVSFDDIENETLANEKYDILEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLGFIGPDNK CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCCC NNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLFKVDRFDK CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]