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The map label for this gene is slyA [C]

Identifier: 126700460

GI number: 126700460

Start: 3326415

End: 3326852

Strand: Direct

Name: slyA [C]

Synonym: CD2844

Alternate gene names: 126700460

Gene position: 3326415-3326852 (Clockwise)

Preceding gene: 126700458

Following gene: 126700461

Centisome position: 77.53

GC content: 25.57

Gene sequence:

>438_bases
ATGGAAGATAAATATATTGTACATTTCATAAGTAAAACAAAGGCTAGTATGATTAAATTCATTGAAAATAAACTCAGTAA
AAATGGTTTAGGTGAGTTAATACCTACTCATGGAAATATTTTAACTGCACTTTATGAAAATAATGGAATACTTACAATGA
AAGAAATTGCAGCTAAAATAGGAAAAGATAAATCCACTGTTACAGTGTTGGTTAATAAACTTATAAACCTAGGATATTTA
GAAAGACAAAAATGTACAAATGACAAACGTATCACGTATATAAAGCTTACAAAAAAGGCACTGCTTATAGAAGATACTTT
TAATAGCATCTCAACACAAGTTAAAGAGACGGCATATCATAATATTACAGAAAATGAAAAACAAGAATTTCTTAGAATTT
TAAAAAAAATTAATGATAATTTTAAAAATGCTGACTAA

Upstream 100 bases:

>100_bases
TTTCCTCCCAATACATTTAGTTTTATGTTAAACTAATTATAGTTTATAAATAGTTTTATGTCAAACTAATTTAAATAGAT
TAAAGATTGGAGAATAATTT

Downstream 100 bases:

>100_bases
ATTGAGCATAATTATATCTCCTATTGGAATAATAAATAAAAAGAATCAAATATTGTAAAAATTTATTGTGATAGAGAGGT
AGAATATGAATTTAAAAGAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein MarR; Transcription Repressor; MarR-Family Transcriptional Regulator; Marr-Family Transcriptional Regulator; MarR Family Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEDKYIVHFISKTKASMIKFIENKLSKNGLGELIPTHGNILTALYENNGILTMKEIAAKIGKDKSTVTVLVNKLINLGYL
ERQKCTNDKRITYIKLTKKALLIEDTFNSISTQVKETAYHNITENEKQEFLRILKKINDNFKNAD

Sequences:

>Translated_145_residues
MEDKYIVHFISKTKASMIKFIENKLSKNGLGELIPTHGNILTALYENNGILTMKEIAAKIGKDKSTVTVLVNKLINLGYL
ERQKCTNDKRITYIKLTKKALLIEDTFNSISTQVKETAYHNITENEKQEFLRILKKINDNFKNAD
>Mature_145_residues
MEDKYIVHFISKTKASMIKFIENKLSKNGLGELIPTHGNILTALYENNGILTMKEIAAKIGKDKSTVTVLVNKLINLGYL
ERQKCTNDKRITYIKLTKKALLIEDTFNSISTQVKETAYHNITENEKQEFLRILKKINDNFKNAD

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16622; Mature: 16622

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKYIVHFISKTKASMIKFIENKLSKNGLGELIPTHGNILTALYENNGILTMKEIAAKI
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHH
GKDKSTVTVLVNKLINLGYLERQKCTNDKRITYIKLTKKALLIEDTFNSISTQVKETAYH
CCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
NITENEKQEFLRILKKINDNFKNAD
CCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEDKYIVHFISKTKASMIKFIENKLSKNGLGELIPTHGNILTALYENNGILTMKEIAAKI
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHH
GKDKSTVTVLVNKLINLGYLERQKCTNDKRITYIKLTKKALLIEDTFNSISTQVKETAYH
CCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
NITENEKQEFLRILKKINDNFKNAD
CCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA