Click here to switch to the map view.

The map label for this gene is 126700343

Identifier: 126700343

GI number: 126700343

Start: 3165097

End: 3165570

Strand: Direct

Name: 126700343

Synonym: CD2728

Alternate gene names: NA

Gene position: 3165097-3165570 (Clockwise)

Preceding gene: 126700342

Following gene: 126700347

Centisome position: 73.77

GC content: 33.54

Gene sequence:

>474_bases
ATGACTGATATGTCTATGATTTTGCATTTTTTATTTTCAGGTGTTGCAACTGCTGGATTTGCTGTTTTCTTTAATGCTCC
ACTATATCTACTTCTTCCAGCTGGAGTAACTGGCGGAATTGGTTGGATTGTATATGTTTATTTATTTAATTTTACTACAA
ATGCAGTTTTTGCAGGTTTTATCGCTGCTGCTTTGGTCTCAGCGTGCAGTGAGACTTTAGCAAGAAAACTAAAGCAACCA
GCTATTGTGTTCGTAATTCCAGGTATTCTTCCTCTAATACCAGGAATTGGGCTATATAATACAATGTTGTCTTTGATTCA
GAAAAATTATTCTTTGGCTATGTCAAAAGGTACAGATGCTCTATTTCTAAGTGCTGCAATAGCACTTGGTGTATTAGTTG
TAACTTCTTTTGTAAGAACATTGAATCTTTTGAAAATCAGAAAAAACTTTATTCCTTACAGAAAATCAAAATAA

Upstream 100 bases:

>100_bases
GAATTTCTCGTGCTTTTGATGCTGCTATGATTATTATTGCAATTGCTTCTGGAGTTGGTTTTGTCCTTGATACATGGTAT
AGAATAGGAGGTCCTTTCTA

Downstream 100 bases:

>100_bases
AAATATAAAAATAGCAATGTACTTAAACTCTACAAATACGTATTGAGTATTTATTTAAAAGCACATTGCTATTTTTTAAT
TATAATTATCTTAAAGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGFIAAALVSACSETLARKLKQP
AIVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDALFLSAAIALGVLVVTSFVRTLNLLKIRKNFIPYRKSK

Sequences:

>Translated_157_residues
MTDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGFIAAALVSACSETLARKLKQP
AIVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDALFLSAAIALGVLVVTSFVRTLNLLKIRKNFIPYRKSK
>Mature_156_residues
TDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGFIAAALVSACSETLARKLKQPA
IVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDALFLSAAIALGVLVVTSFVRTLNLLKIRKNFIPYRKSK

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16946; Mature: 16814

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGF
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
IAAALVSACSETLARKLKQPAIVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDA
HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH
LFLSAAIALGVLVVTSFVRTLNLLKIRKNFIPYRKSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGF
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
IAAALVSACSETLARKLKQPAIVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDA
HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH
LFLSAAIALGVLVVTSFVRTLNLLKIRKNFIPYRKSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA