| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yieG [C]
Identifier: 126700318
GI number: 126700318
Start: 3125620
End: 3126963
Strand: Direct
Name: yieG [C]
Synonym: CD2704
Alternate gene names: 126700318
Gene position: 3125620-3126963 (Clockwise)
Preceding gene: 126700314
Following gene: 126700319
Centisome position: 72.85
GC content: 33.93
Gene sequence:
>1344_bases ATGGTACCAAACACTAACAATGTACAACCAGGTGGAAATAATTCATCATTAAGCTTTTTAGACAAAATGTTTAAATTTAG CGAACGTGGCTCTAGCCTTAAAACAGAAGTAATAGGTGGAGTTACTACATTCTTAACAATGGCATACATAGTTTTCGTAA ATCCAGCAATATTATCTGAAGCTGGAATGGATAAAGCCGCCCTTATAACAGTTACTATACTAGCTACAGCAATTGGTACA CTTATATTTGCGATTTTAGGAAATGCACCATTTGCTCTAGCTCCTGGTATGGGATTAAATGCATTTTTCACATACTCTTT GGTTATAGGTGCAGGAATCCCATGGCAAACAGGTCTTGGGGTAGTTTTTCTATCTGGATGTGTCTTCTTTACACTCGCAG TAACAGGTCTTCGAAAGACAATTGCAGACGCAATTCCTAGAGAATTGGCAGTAGCATCTTCAGCAGGTATAGGTCTTTTC CTTGCTTTTGTTGGTTTAAAAAATATGGGTGTTATAATAGCTAATCCAGATACTATAGTTTCACTTGCAGATTTTACACC AACAGTTTTAATAGCTCTTTTTGCTCTTATCTTAATGGCAATACTAGAATATAAAAAAGTTAAAGGTGGAATATTGATAA GTATAGTAGTTGCAACAATAATATCTGTTATATTTGGATTTGTGGAGTTGCCAACAGCAATAATCTCAACACCTCCTAGT ATAGCACCAGTTGCTTTTAAATTAGATATTGTAGGTGCATTGAAATTCTCATTAATTGGACCTATATTCTCTTTCATGTT TATAGACATGTTTGATTCATTAGCATTTCTTATTACTTGTTGTAAACAAATGGGTCTTGAAGATGAGAATGGTGAAATAA AAGATTTAGGAAGAATGTTATATGCAGATGTTTCTTCTACTTTAATAGGCTCATTCTTAGGAACTAGTACTGTTACAACA TTTGGAGAATCTGCTTCCGGTATTGCAGCAGGTGCAAGAACAGGACTTGCTTCAATAGTAACAGCAGCATTATTCTTAGC TACACTTATATTTACACCATTACTTGGTATAGTTCCTACTTACGCTGCAGCTCCTGCACTTGTAATGGTTGGTGTATTCA TGTTTGAAAGCATAAAACAGATTGATTTTGCTGATAGCAAAATAGCTGTACCTGCTTTTGTTACAGTTTTATTGATGCCT TTAACTTATAGTATAAGTATTGGTTTATGCTTTGGATTTATTTCATATATAATAATGCATGTAGTAGCTAAAGAAACTGA TAAAATCAGTATTACACTTTGGATTATAGGTTTACTTGCAGTTGTAAACTTAGTTCTAAGTTAA
Upstream 100 bases:
>100_bases GTTTTCTATGAATAGAATGTCAACTCTGAATATATGTTCTATTCTATCTATATGAATATATATTTTTTTGTTTATATCTT AAAGTTTTTTGGAGGTAAAA
Downstream 100 bases:
>100_bases TATTTTTAAATAGTTCTAGGTCAATATTTTAAATTATATAGAATAAAATCTTATTTATTTTAAATTTATAAATAGCAAAA TCACTTTATATGTAAATTGA
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MVPNTNNVQPGGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSEAGMDKAALITVTILATAIGT LIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLGVVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLF LAFVGLKNMGVIIANPDTIVSLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPS IAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRMLYADVSSTLIGSFLGTSTVTT FGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPTYAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMP LTYSISIGLCFGFISYIIMHVVAKETDKISITLWIIGLLAVVNLVLS
Sequences:
>Translated_447_residues MVPNTNNVQPGGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSEAGMDKAALITVTILATAIGT LIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLGVVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLF LAFVGLKNMGVIIANPDTIVSLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPS IAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRMLYADVSSTLIGSFLGTSTVTT FGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPTYAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMP LTYSISIGLCFGFISYIIMHVVAKETDKISITLWIIGLLAVVNLVLS >Mature_447_residues MVPNTNNVQPGGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSEAGMDKAALITVTILATAIGT LIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLGVVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLF LAFVGLKNMGVIIANPDTIVSLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPS IAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRMLYADVSSTLIGSFLGTSTVTT FGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPTYAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMP LTYSISIGLCFGFISYIIMHVVAKETDKISITLWIIGLLAVVNLVLS
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=438, Percent_Identity=41.7808219178082, Blast_Score=336, Evalue=2e-93, Organism=Escherichia coli, GI87082309, Length=444, Percent_Identity=40.7657657657658, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1790499, Length=438, Percent_Identity=35.3881278538813, Blast_Score=231, Evalue=9e-62, Organism=Escherichia coli, GI48994909, Length=427, Percent_Identity=35.1288056206089, Blast_Score=220, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46918; Mature: 46918
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPNTNNVQPGGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSE CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH AGMDKAALITVTILATAIGTLIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHH VVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLFLAFVGLKNMGVIIANPDTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCEE SLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPS EHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRML CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH YADVSSTLIGSFLGTSTVTTFGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPT HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMPLTYSISIGLCFGFISYIIMH HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAKETDKISITLWIIGLLAVVNLVLS HHHCCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVPNTNNVQPGGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSE CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH AGMDKAALITVTILATAIGTLIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHH VVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLFLAFVGLKNMGVIIANPDTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCEE SLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPS EHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRML CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH YADVSSTLIGSFLGTSTVTTFGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPT HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMPLTYSISIGLCFGFISYIIMH HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAKETDKISITLWIIGLLAVVNLVLS HHHCCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]