| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700301
Identifier: 126700301
GI number: 126700301
Start: 3106455
End: 3106916
Strand: Direct
Name: 126700301
Synonym: CD2687
Alternate gene names: NA
Gene position: 3106455-3106916 (Clockwise)
Preceding gene: 126700295
Following gene: 126700306
Centisome position: 72.41
GC content: 23.81
Gene sequence:
>462_bases GTGCAAATAGAACAACTCGATTTAGAAACGAGAAATAAAATATACTGCTATACTAAAAAAATTCTTAGAAAATATCAAAA AGGCATAACATCTGGAAAATTAACAGCAGATAAATTTGCAGATAATATATTGTCTCAAGATTTTATCAGTAGTATACTTA ATGAAAAAATAGTCAATGAGACAAACTTTAAGATATCTTATAGAAACTATATAGAAACTTTAATAAATATTCAAAATGAA AATTTATCTAACTTAAGAAAAAAATCTACTAAAACTGCAAAATGTTTCAATATCTCTCAAATAACCCAATTAAAAAACTT ACTAAGTAATACTGGTTATAATTTATTAATTCCATATAAATACTTAACTGCTAGAGATATAGAAGGAATCGTTACTCTTA TTAATACTGGGTCTATTGAACTTGGAAATGAGAGAATCTACAATTATATATCAAAAGCATAA
Upstream 100 bases:
>100_bases ATTTTATGACTTAGTATTTATTGTAAATAAGTTATTGAAGCTTTATTAGTTAAGTATAGATTTTTAATAAATATTTTTAT AATTAGAAGGAAGTGGTTTT
Downstream 100 bases:
>100_bases TAATTTAAACCTATTATAAAAAGGCAATTTATTTAATAAAAAATATTTTTAATATTAAATAAATTGCCTTTTTAATTTTG GACTAAATACTGCTATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQIEQLDLETRNKIYCYTKKILRKYQKGITSGKLTADKFADNILSQDFISSILNEKIVNETNFKISYRNYIETLINIQNE NLSNLRKKSTKTAKCFNISQITQLKNLLSNTGYNLLIPYKYLTARDIEGIVTLINTGSIELGNERIYNYISKA
Sequences:
>Translated_153_residues MQIEQLDLETRNKIYCYTKKILRKYQKGITSGKLTADKFADNILSQDFISSILNEKIVNETNFKISYRNYIETLINIQNE NLSNLRKKSTKTAKCFNISQITQLKNLLSNTGYNLLIPYKYLTARDIEGIVTLINTGSIELGNERIYNYISKA >Mature_153_residues MQIEQLDLETRNKIYCYTKKILRKYQKGITSGKLTADKFADNILSQDFISSILNEKIVNETNFKISYRNYIETLINIQNE NLSNLRKKSTKTAKCFNISQITQLKNLLSNTGYNLLIPYKYLTARDIEGIVTLINTGSIELGNERIYNYISKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17704; Mature: 17704
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIEQLDLETRNKIYCYTKKILRKYQKGITSGKLTADKFADNILSQDFISSILNEKIVNE CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC TNFKISYRNYIETLINIQNENLSNLRKKSTKTAKCFNISQITQLKNLLSNTGYNLLIPYK CCCEEHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEHH YLTARDIEGIVTLINTGSIELGNERIYNYISKA HHHHHHHHHHHHEEECCCEEECHHHHHHHHHCC >Mature Secondary Structure MQIEQLDLETRNKIYCYTKKILRKYQKGITSGKLTADKFADNILSQDFISSILNEKIVNE CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC TNFKISYRNYIETLINIQNENLSNLRKKSTKTAKCFNISQITQLKNLLSNTGYNLLIPYK CCCEEHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEHH YLTARDIEGIVTLINTGSIELGNERIYNYISKA HHHHHHHHHHHHEEECCCEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA