| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ansA [H]
Identifier: 126700132
GI number: 126700132
Start: 2905443
End: 2906438
Strand: Direct
Name: ansA [H]
Synonym: CD2516
Alternate gene names: 126700132
Gene position: 2905443-2906438 (Clockwise)
Preceding gene: 126700131
Following gene: 126700136
Centisome position: 67.72
GC content: 32.53
Gene sequence:
>996_bases ATGAGTATTAAGAAAAAAGTTGCCATAGTTTTTACTGGTGGAACTATATCTATGACAGTAGATGATAAAGTCGGAGCAGC TATACCAACTTTATCAGGTGAACAAATACTATCAATGGTTACCAACATTGATAAAGTTGCAGATGTTGAAGTTTTTAATT TTGATGAAATTCCAGGACCTCACATAACACCTTATAGAATGATGGAATTGAAAAACTATGTAAATGATTTATTAGCAAGA AAAGATATTACAGGTGTTGTAATAACACATGGTACAGATAGTTTAGAGGAAACAGCTTATTTCCTAGACCTTACAATTGA CAACATCAAACCTGTAATAGTCACAGGTGCTATGAGAAGTAGTTCTGAACTTGGATATGATGGTTCAAGTAATTTATCTG CATCAGTTTGTACTGCAGTATCCAAAGATGCTATGGGAAAAGGAGTCCTTGTAGTTTTAAACAATGAAGTATTATTAGCT TCTGAAGCTACTAAAACAAATACTCTTTCTCTAAATACATTTAAATCTCTAACTAGTGGTCCATTGGGAATAATTGACTG CAACGAACTTGTCCTTACAAGAGATATTGTAAATAGAACAATTATAGATACTGATAAGGTAGAATCTAAAGTTGCCTTAT TTAAAGCATATGTAGGAGAAAATGCTGACTTTATAAGATTTGCTGTTGATAGTGGTTATAAAGGTATAGTTATTGAGGCA ATGGGTAGAGGTAATATTCCTCCTCAAATGCTTTCTGGAGTTGAATATGCTAGAGAAAAAGGACTTCCTGTAGTTATAGT TTCTAGATGTCATTCAGGTAGAGTATTCGATAGTTATGGTTACTTTGGTTCTGGTAGAGATTTAAAAAATCTTGGTTGTA TATTTGGTGGAGACTTACCAGGTCAAAAAGCTAGAATAAAACTTATCTTAGCACTTGGAAAAACTGATAACCTTGATGAA ATCAAAGACTTCTTTGAAAAAGGAATCTATTGTTAA
Upstream 100 bases:
>100_bases TAAATTATATGAATAAAAGAGTTTATGTAGACCTTAACTACTTTTTTTGATATAATCCTATCGGAATTATAAATTTTATT TATGAAAGGCAGAGAATAGT
Downstream 100 bases:
>100_bases TTCTAATAACTTCTATTTAATTATTTATTGATATTTCAACATTTTTAAATCAAAATCTAATACTTATGTCAGTTAAATGT CAGCAAAATATTTTATCCAC
Product: L-asparaginase
Products: NA
Alternate protein names: L-ASNase; L-asparagine amidohydrolase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMELKNYVNDLLAR KDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLA SEATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEA MGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDE IKDFFEKGIYC
Sequences:
>Translated_331_residues MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMELKNYVNDLLAR KDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLA SEATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEA MGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDE IKDFFEKGIYC >Mature_330_residues SIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMELKNYVNDLLARK DITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLAS EATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEAM GRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDEI KDFFEKGIYC
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=252, Percent_Identity=28.1746031746032, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1789327, Length=249, Percent_Identity=38.1526104417671, Blast_Score=145, Evalue=3e-36, Organism=Caenorhabditis elegans, GI193207372, Length=346, Percent_Identity=25.4335260115607, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17558278, Length=346, Percent_Identity=25.4335260115607, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17558280, Length=346, Percent_Identity=25.4335260115607, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193207374, Length=346, Percent_Identity=25.4335260115607, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323189, Length=341, Percent_Identity=30.2052785923754, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323187, Length=341, Percent_Identity=30.2052785923754, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323186, Length=341, Percent_Identity=30.2052785923754, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323184, Length=341, Percent_Identity=30.2052785923754, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320527, Length=337, Percent_Identity=31.7507418397626, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI24645530, Length=346, Percent_Identity=25.7225433526012, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24639609, Length=362, Percent_Identity=23.7569060773481, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 35773; Mature: 35641
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGP CCCCCEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCC HITPYRMMELKNYVNDLLARKDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRS CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCEEEEEEEECCCCEEEEEECCCC SSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLASEATKTNTLSLNTFKSLTSG CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCEEEEHHHHHHCCC PLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEA CEEEEECCHHEEEHHHHHCEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEE MGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLP CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCEEECCCCC GQKARIKLILALGKTDNLDEIKDFFEKGIYC CCCEEEEEEEEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGP CCCCEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCC HITPYRMMELKNYVNDLLARKDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRS CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCEEEEEEEECCCCEEEEEECCCC SSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLASEATKTNTLSLNTFKSLTSG CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCEEEEHHHHHHCCC PLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEA CEEEEECCHHEEEHHHHHCEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEE MGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLP CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCEEECCCCC GQKARIKLILALGKTDNLDEIKDFFEKGIYC CCCEEEEEEEEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916233 [H]