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The map label for this gene is 126700023

Identifier: 126700023

GI number: 126700023

Start: 2779272

End: 2780591

Strand: Direct

Name: 126700023

Synonym: CD2408

Alternate gene names: NA

Gene position: 2779272-2780591 (Clockwise)

Preceding gene: 126700022

Following gene: 126700047

Centisome position: 64.78

GC content: 27.88

Gene sequence:

>1320_bases
GTGATTGTATTGAATAAAAAAATGAGCAAAATAGTTGCAATTGGCTGTGGTGTTGGTATAATAACTGCCAATTTAATCCC
AGTTTACGCAGATAATAATACTTCTTCTATAAACAAAGTTGATAATTCTATTTTAAGTGACTCAAATAAAAGAACATCTG
AAAAGGAAATTTTGACTGCTAGAGAAGCTGTTAGTGCTGCACTTAAAAATAGTGAAAAATTAAAAATGAAATCAGAAGAA
ATAAAAATGTTAAAAGAAAAGTTAGAAGTACAAGATGAGTTTGATAGTTTTACTGGAAGTGACAACTCGTTTCCATACGA
CCAAATTGGACTTCTTAAAAATCAAAGTGAACAGGCTAAAGGCTTTATGGAGGACCAAATAGCAAATGATATTACTAATA
AATTTAACGATTTAGTTTCAAGAGAAAATGAGCTAGATAAAATAAAAAACAATCTTGAAATAAAAACTAAAGAAATTAAA
GATATGAAATTAAAAAAAGATTTAGGGTTAGTAACATCTTTAGAAACTGAATCAGCTGAACTTGAACTTCAAACACTACA
AAATACTCAAAAAGCTAAACTTCAAGAACTAAAAAACAATCAAGACTATTTTAAGTTATTAACTAATATAGATTTAAATA
ATTATCAATTGGATAAAGAATATAGATTTGAATCTTTTAGAGTAGGTGGCTCAGTTGATTCATATATGGAAGGTAAGGTT
AATGAATATTTAAAATACGACCAATTGATTTTAGAACGTACAGAAGAAAGCTTTAATGATAAAGATGAGAACAAAGCAGA
TTTACCAGATAGACCTAATCTTACAAGACCAGTTGCTCCTACAAAACCAGAGCAAGGTAACCTAACTGATGATGAATATA
AGGTTCTTACGGATAAGTATGAAAAAGACTACAAGAGATATGAAAAAGAAGTTGAAGCATACAATCTTGAAAGACAGACT
TATGCTGCTGGCCTTACTACTTATGCAAATTATCTTCAACAAAAATTTAATACCGAAAATGGTCTAGTAACATTAGAAGA
CAGTAAAAAAGCTCTTAAAAAAGGGTTAATTGATAGCTATGCTCAATTACTTGCTTTAGAAGATACAATTCAGATTACTA
AAAAACAACTTGATTTATCAGAAAAACAATTAAAAAATACTAAATTAAGATATGATTTAGGATTAATTACTCTAACTGAT
TATAAAAAACAAGTGGTAAGTAATGAAGATGCTAAAAATAGCTATGACACTCTTATTGTGAATTATAACTCACTAAAAAA
TGGTATAGAAAAACCTTGGATACTTAATACTGGAAAATAA

Upstream 100 bases:

>100_bases
GCCTAAAATATTTGGTAAGATAACAGATAAAATAGGAAGTATAAAACGTAAAATAATAAAGAAACCAAAATTGAAAGCTA
AAGTTTAAATAGAATGGAGG

Downstream 100 bases:

>100_bases
TTCTGGTAAATAGAAAGATTACTTTAACATACGTTTGATTAAAAAATAGTTATGCACACTCGTTGCTTTAGTCATGGAAG
ATTCAGAAGGCAAATAATAG

Product: multidrug efflux pump, outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MIVLNKKMSKIVAIGCGVGIITANLIPVYADNNTSSINKVDNSILSDSNKRTSEKEILTAREAVSAALKNSEKLKMKSEE
IKMLKEKLEVQDEFDSFTGSDNSFPYDQIGLLKNQSEQAKGFMEDQIANDITNKFNDLVSRENELDKIKNNLEIKTKEIK
DMKLKKDLGLVTSLETESAELELQTLQNTQKAKLQELKNNQDYFKLLTNIDLNNYQLDKEYRFESFRVGGSVDSYMEGKV
NEYLKYDQLILERTEESFNDKDENKADLPDRPNLTRPVAPTKPEQGNLTDDEYKVLTDKYEKDYKRYEKEVEAYNLERQT
YAAGLTTYANYLQQKFNTENGLVTLEDSKKALKKGLIDSYAQLLALEDTIQITKKQLDLSEKQLKNTKLRYDLGLITLTD
YKKQVVSNEDAKNSYDTLIVNYNSLKNGIEKPWILNTGK

Sequences:

>Translated_439_residues
MIVLNKKMSKIVAIGCGVGIITANLIPVYADNNTSSINKVDNSILSDSNKRTSEKEILTAREAVSAALKNSEKLKMKSEE
IKMLKEKLEVQDEFDSFTGSDNSFPYDQIGLLKNQSEQAKGFMEDQIANDITNKFNDLVSRENELDKIKNNLEIKTKEIK
DMKLKKDLGLVTSLETESAELELQTLQNTQKAKLQELKNNQDYFKLLTNIDLNNYQLDKEYRFESFRVGGSVDSYMEGKV
NEYLKYDQLILERTEESFNDKDENKADLPDRPNLTRPVAPTKPEQGNLTDDEYKVLTDKYEKDYKRYEKEVEAYNLERQT
YAAGLTTYANYLQQKFNTENGLVTLEDSKKALKKGLIDSYAQLLALEDTIQITKKQLDLSEKQLKNTKLRYDLGLITLTD
YKKQVVSNEDAKNSYDTLIVNYNSLKNGIEKPWILNTGK
>Mature_439_residues
MIVLNKKMSKIVAIGCGVGIITANLIPVYADNNTSSINKVDNSILSDSNKRTSEKEILTAREAVSAALKNSEKLKMKSEE
IKMLKEKLEVQDEFDSFTGSDNSFPYDQIGLLKNQSEQAKGFMEDQIANDITNKFNDLVSRENELDKIKNNLEIKTKEIK
DMKLKKDLGLVTSLETESAELELQTLQNTQKAKLQELKNNQDYFKLLTNIDLNNYQLDKEYRFESFRVGGSVDSYMEGKV
NEYLKYDQLILERTEESFNDKDENKADLPDRPNLTRPVAPTKPEQGNLTDDEYKVLTDKYEKDYKRYEKEVEAYNLERQT
YAAGLTTYANYLQQKFNTENGLVTLEDSKKALKKGLIDSYAQLLALEDTIQITKKQLDLSEKQLKNTKLRYDLGLITLTD
YKKQVVSNEDAKNSYDTLIVNYNSLKNGIEKPWILNTGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50358; Mature: 50358

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLNKKMSKIVAIGCGVGIITANLIPVYADNNTSSINKVDNSILSDSNKRTSEKEILTA
CEEECCHHHHHHHHHCCHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
REAVSAALKNSEKLKMKSEEIKMLKEKLEVQDEFDSFTGSDNSFPYDQIGLLKNQSEQAK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHH
GFMEDQIANDITNKFNDLVSRENELDKIKNNLEIKTKEIKDMKLKKDLGLVTSLETESAE
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCEECCCCCHH
LELQTLQNTQKAKLQELKNNQDYFKLLTNIDLNNYQLDKEYRFESFRVGGSVDSYMEGKV
HHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCEECCHHHCHHHEECCCCHHHHHHHHH
NEYLKYDQLILERTEESFNDKDENKADLPDRPNLTRPVAPTKPEQGNLTDDEYKVLTDKY
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
EKDYKRYEKEVEAYNLERQTYAAGLTTYANYLQQKFNTENGLVTLEDSKKALKKGLIDSY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
AQLLALEDTIQITKKQLDLSEKQLKNTKLRYDLGLITLTDYKKQVVSNEDAKNSYDTLIV
HHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEEECHHHHHHHCCCCCCCCCCEEEE
NYNSLKNGIEKPWILNTGK
ECHHHHCCCCCCEEECCCC
>Mature Secondary Structure
MIVLNKKMSKIVAIGCGVGIITANLIPVYADNNTSSINKVDNSILSDSNKRTSEKEILTA
CEEECCHHHHHHHHHCCHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
REAVSAALKNSEKLKMKSEEIKMLKEKLEVQDEFDSFTGSDNSFPYDQIGLLKNQSEQAK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHH
GFMEDQIANDITNKFNDLVSRENELDKIKNNLEIKTKEIKDMKLKKDLGLVTSLETESAE
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCEECCCCCHH
LELQTLQNTQKAKLQELKNNQDYFKLLTNIDLNNYQLDKEYRFESFRVGGSVDSYMEGKV
HHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCEECCHHHCHHHEECCCCHHHHHHHHH
NEYLKYDQLILERTEESFNDKDENKADLPDRPNLTRPVAPTKPEQGNLTDDEYKVLTDKY
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
EKDYKRYEKEVEAYNLERQTYAAGLTTYANYLQQKFNTENGLVTLEDSKKALKKGLIDSY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
AQLLALEDTIQITKKQLDLSEKQLKNTKLRYDLGLITLTDYKKQVVSNEDAKNSYDTLIV
HHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEEECHHHHHHHCCCCCCCCCCEEEE
NYNSLKNGIEKPWILNTGK
ECHHHHCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA