The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yegM [C]

Identifier: 126700021

GI number: 126700021

Start: 2774898

End: 2776121

Strand: Direct

Name: yegM [C]

Synonym: CD2406

Alternate gene names: 126700021

Gene position: 2774898-2776121 (Clockwise)

Preceding gene: 126700019

Following gene: 126700022

Centisome position: 64.68

GC content: 31.62

Gene sequence:

>1224_bases
ATGAAAAGATATTTAATAGTTTTCTTAATGTGTAGTTCACTGTTTTTAGTTGGATGTGGAAAAACAGAAGAATCTGAACC
TGAGAAACCAATAGCAGTTTCTGTTCAAAAAGCAATAGGTGGAGAAATTGAAAACACAAATTCTTTCTCAGGAACTACAA
AGGTTAAAGATGAAACAGCTGTTACTGCACAGACTGTTGGCACAGTTCAAGAAGTGTATGTAAAACTTGGGCAAAATGTA
AGAAAAGGAGATGAATTATTGAGTATAAGCAGTCCAGAGCTAGAAAATAGTGTAAAGCAAAGTAAAGCCTCACTAGATTT
AGCAAAAGCAAGTTATTCAAGTGCCACTGGTGGTTCATTAGAGGCACAAGTAAATCAGGCAAAAACAGCTCTTGACAATG
CAAAGATTCAATATGAGGAGTCTCAAAGAAATTATGACAATAATAAGATTCTTTATGAACAGGAAGTCATTAGTTTAGAC
CAATTTAAAAAAATAGAATTTTCTTTAGAGCAAACAAAACAACAGTTAGATTCTGCTCAAAGAGCATACGATACAGCAAC
TTCAAAAAGTATACCTCAAGCTAAAGCACTTGCTAAAAAACAGCTTGACCAAGCTCAAGTATCATATAATTTAGCAATGA
GTAATTTAGACAAATTAACATTAACATCTCCAGTAGATGGTACAATAACAGCTAAAAACTTTGATTCAAAGGAAATGATA
ACACAATCACAACCAGCTTTTATTATTTCTAATCCTAATATACTAGAAGTTGATTTAAATGTAGCAGAATCAGATATAGG
TAAATTTAAGAAAGATGGAAATGTAGATGTTATAATTGAAGACCAAAGGATTTTAGGAAAAATAGATTATGTACCTTCAG
TAGTTGACCCTCAGACATCTTTATATCCTGTTAAAGTACTTGTAAATAATACAAACAACAAATTTAAGGCAGGTATGTCT
GCTCAAGTAAACTTAAGTGTTGAAAAAGAAAATGGTGCTGTTACAGTACCTAAAAAAGCAATATTTGAAGAAAATGGTAA
AAAATATGTATACATAGCAACAAAAGACAATATAGCAAAGAAACACTTGGTTCAAACTGGAATTGTAACAGAGGATAAAA
TAGAAATTAAAAGTGGTGTAAGTGATAAAGATACAGTGATTATCGGAGGGATAAGTCTTATTTCTGACGGAACTAAGATA
TTTCCTGTAGAAAAGGAGAAGTAG

Upstream 100 bases:

>100_bases
AATAAAGGGAAGTTTTTTAATTAGTCTAAAACTAAACTTAAATTATAAGACACTTTAAATTCTACAACAAGCTAGTGTGC
AATATATAATAGGAGGAGAT

Downstream 100 bases:

>100_bases
ACTATGAATTTAACACAGACTTCCGTTAAACGTCCTCTCACAATCATAATGGTCTTTTTAGTATTAATAGTTTTTGGTGG
TATTGGATATAAAAAAATGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKRYLIVFLMCSSLFLVGCGKTEESEPEKPIAVSVQKAIGGEIENTNSFSGTTKVKDETAVTAQTVGTVQEVYVKLGQNV
RKGDELLSISSPELENSVKQSKASLDLAKASYSSATGGSLEAQVNQAKTALDNAKIQYEESQRNYDNNKILYEQEVISLD
QFKKIEFSLEQTKQQLDSAQRAYDTATSKSIPQAKALAKKQLDQAQVSYNLAMSNLDKLTLTSPVDGTITAKNFDSKEMI
TQSQPAFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIEDQRILGKIDYVPSVVDPQTSLYPVKVLVNNTNNKFKAGMS
AQVNLSVEKENGAVTVPKKAIFEENGKKYVYIATKDNIAKKHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKI
FPVEKEK

Sequences:

>Translated_407_residues
MKRYLIVFLMCSSLFLVGCGKTEESEPEKPIAVSVQKAIGGEIENTNSFSGTTKVKDETAVTAQTVGTVQEVYVKLGQNV
RKGDELLSISSPELENSVKQSKASLDLAKASYSSATGGSLEAQVNQAKTALDNAKIQYEESQRNYDNNKILYEQEVISLD
QFKKIEFSLEQTKQQLDSAQRAYDTATSKSIPQAKALAKKQLDQAQVSYNLAMSNLDKLTLTSPVDGTITAKNFDSKEMI
TQSQPAFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIEDQRILGKIDYVPSVVDPQTSLYPVKVLVNNTNNKFKAGMS
AQVNLSVEKENGAVTVPKKAIFEENGKKYVYIATKDNIAKKHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKI
FPVEKEK
>Mature_407_residues
MKRYLIVFLMCSSLFLVGCGKTEESEPEKPIAVSVQKAIGGEIENTNSFSGTTKVKDETAVTAQTVGTVQEVYVKLGQNV
RKGDELLSISSPELENSVKQSKASLDLAKASYSSATGGSLEAQVNQAKTALDNAKIQYEESQRNYDNNKILYEQEVISLD
QFKKIEFSLEQTKQQLDSAQRAYDTATSKSIPQAKALAKKQLDQAQVSYNLAMSNLDKLTLTSPVDGTITAKNFDSKEMI
TQSQPAFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIEDQRILGKIDYVPSVVDPQTSLYPVKVLVNNTNNKFKAGMS
AQVNLSVEKENGAVTVPKKAIFEENGKKYVYIATKDNIAKKHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKI
FPVEKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=402, Percent_Identity=22.8855721393035, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 44525; Mature: 44525

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYLIVFLMCSSLFLVGCGKTEESEPEKPIAVSVQKAIGGEIENTNSFSGTTKVKDETA
CCCCEEHHHHHHHHHEEECCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHH
VTAQTVGTVQEVYVKLGQNVRKGDELLSISSPELENSVKQSKASLDLAKASYSSATGGSL
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
EAQVNQAKTALDNAKIQYEESQRNYDNNKILYEQEVISLDQFKKIEFSLEQTKQQLDSAQ
EHHHHHHHHHHCCCEEEEEHHHCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHH
RAYDTATSKSIPQAKALAKKQLDQAQVSYNLAMSNLDKLTLTSPVDGTITAKNFDSKEMI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCHHHH
TQSQPAFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIEDQRILGKIDYVPSVVDPQTS
HCCCCEEEECCCCEEEEECCCCHHHHHHHCCCCCEEEEECCHHHHEEECCCCCCCCCCCC
LYPVKVLVNNTNNKFKAGMSAQVNLSVEKENGAVTVPKKAIFEENGKKYVYIATKDNIAK
EEEEEEEEECCCCCEECCCCEEEEEEEECCCCEEECCHHHHHHCCCCEEEEEEECCCHHH
KHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKIFPVEKEK
HHHHHHCCCCCCCCHHHCCCCCCCEEEEECEEEECCCCEEEEECCCC
>Mature Secondary Structure
MKRYLIVFLMCSSLFLVGCGKTEESEPEKPIAVSVQKAIGGEIENTNSFSGTTKVKDETA
CCCCEEHHHHHHHHHEEECCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHH
VTAQTVGTVQEVYVKLGQNVRKGDELLSISSPELENSVKQSKASLDLAKASYSSATGGSL
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
EAQVNQAKTALDNAKIQYEESQRNYDNNKILYEQEVISLDQFKKIEFSLEQTKQQLDSAQ
EHHHHHHHHHHCCCEEEEEHHHCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHH
RAYDTATSKSIPQAKALAKKQLDQAQVSYNLAMSNLDKLTLTSPVDGTITAKNFDSKEMI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCHHHH
TQSQPAFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIEDQRILGKIDYVPSVVDPQTS
HCCCCEEEECCCCEEEEECCCCHHHHHHHCCCCCEEEEECCHHHHEEECCCCCCCCCCCC
LYPVKVLVNNTNNKFKAGMSAQVNLSVEKENGAVTVPKKAIFEENGKKYVYIATKDNIAK
EEEEEEEEECCCCCEECCCCEEEEEEEECCCCEEECCHHHHHHCCCCEEEEEEECCCHHH
KHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKIFPVEKEK
HHHHHHCCCCCCCCHHHCCCCCCCEEEEECEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]