Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yxeH [H]

Identifier: 126699975

GI number: 126699975

Start: 2728293

End: 2729114

Strand: Direct

Name: yxeH [H]

Synonym: CD2359

Alternate gene names: 126699975

Gene position: 2728293-2729114 (Clockwise)

Preceding gene: 126699969

Following gene: 126699988

Centisome position: 63.59

GC content: 28.71

Gene sequence:

>822_bases
ATGTACAAATTAATCGCACTAGACATTGATGGAACAATATTAAATACACAAAAAAGGATTACTCCTGAAGTCTTTGAGTC
CATTCAGGAGGCAAAAAGGGCTGGGGCAAAAGTAGTTATAACAACAGGCAGACCTCTTCCTGGTGTAAAAGAACTTCTAA
ATCAACTAAATTTAACAGATGAAGGTGATTATGTTATATGCTTTAATGGAGCAATTATTCAAGAAGTTAAAAGTGAGAAA
ATCATACATGATGTAGAAATGAGTTTAGATGATTTTGATTTTATATATAATAACGTTTGTAAAAAATATAAGACTAAAAT
ACACATAAATACAATGACAAATTTAATTACACCAAATGAAACGCCTGGCAAATATACACTTCATGAAGCGAAATTAAATA
ATATAGAAGTCAAATATATACAAAAAGATAAAATTGATGAATCTATTAAAATCTGTAAAATTATGATAGTTGATGAACCA
GAAAGATTGGAAGAAATCATACAGCAACTACCTAAAAATTTATTCAATAAATATACTATAGTAAGGTCTGCTCCTTTTTA
TCTAGAATTTTTAGGTAAAACTACTAATAAAGGAACTGCTCTTAAAACATTATGTACGAATCTAAATATACCTATAGAAA
ATGCTATTGCTGTTGGCGATGAAGAAAATGACCAACATATGATAAAGTATGCAGGTCTTGGTGTGGCTATGGGGAATGCA
CGTAATAGTATAAAGGAAATTGCAGATTATGTTACTGATACTAATAATGAAAATGGAGTTGCAAAGGTTATAAATAAATA
TATACTTAATAAGGCTATCTAA

Upstream 100 bases:

>100_bases
TATACAAAACAAACCATATTTCCCACTGAAACTTTGTTCAACACTAGCCGTGTCAACGTTTTCACAGGAAATTTGAGTAT
ATAATTTATTGGAGGTTGAT

Downstream 100 bases:

>100_bases
TCATCTAAAAAAAACTAAAAATATACCTTTAGATTTAAATACTTTTCACATCCCTACTCTATACTAATTTATATAGTATG
GATATTACCTATCATTTTTA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYKLIALDIDGTILNTQKRITPEVFESIQEAKRAGAKVVITTGRPLPGVKELLNQLNLTDEGDYVICFNGAIIQEVKSEK
IIHDVEMSLDDFDFIYNNVCKKYKTKIHINTMTNLITPNETPGKYTLHEAKLNNIEVKYIQKDKIDESIKICKIMIVDEP
ERLEEIIQQLPKNLFNKYTIVRSAPFYLEFLGKTTNKGTALKTLCTNLNIPIENAIAVGDEENDQHMIKYAGLGVAMGNA
RNSIKEIADYVTDTNNENGVAKVINKYILNKAI

Sequences:

>Translated_273_residues
MYKLIALDIDGTILNTQKRITPEVFESIQEAKRAGAKVVITTGRPLPGVKELLNQLNLTDEGDYVICFNGAIIQEVKSEK
IIHDVEMSLDDFDFIYNNVCKKYKTKIHINTMTNLITPNETPGKYTLHEAKLNNIEVKYIQKDKIDESIKICKIMIVDEP
ERLEEIIQQLPKNLFNKYTIVRSAPFYLEFLGKTTNKGTALKTLCTNLNIPIENAIAVGDEENDQHMIKYAGLGVAMGNA
RNSIKEIADYVTDTNNENGVAKVINKYILNKAI
>Mature_273_residues
MYKLIALDIDGTILNTQKRITPEVFESIQEAKRAGAKVVITTGRPLPGVKELLNQLNLTDEGDYVICFNGAIIQEVKSEK
IIHDVEMSLDDFDFIYNNVCKKYKTKIHINTMTNLITPNETPGKYTLHEAKLNNIEVKYIQKDKIDESIKICKIMIVDEP
ERLEEIIQQLPKNLFNKYTIVRSAPFYLEFLGKTTNKGTALKTLCTNLNIPIENAIAVGDEENDQHMIKYAGLGVAMGNA
RNSIKEIADYVTDTNNENGVAKVINKYILNKAI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=41.044776119403, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1787043, Length=271, Percent_Identity=25.4612546125461, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI48994981, Length=281, Percent_Identity=23.8434163701068, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081741, Length=247, Percent_Identity=24.6963562753036, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 30840; Mature: 30840

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLIALDIDGTILNTQKRITPEVFESIQEAKRAGAKVVITTGRPLPGVKELLNQLNLTD
CEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCC
EGDYVICFNGAIIQEVKSEKIIHDVEMSLDDFDFIYNNVCKKYKTKIHINTMTNLITPNE
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEHHHEECCCC
TPGKYTLHEAKLNNIEVKYIQKDKIDESIKICKIMIVDEPERLEEIIQQLPKNLFNKYTI
CCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHEEE
VRSAPFYLEFLGKTTNKGTALKTLCTNLNIPIENAIAVGDEENDQHMIKYAGLGVAMGNA
EECCCHHHHHHCCCCCCCHHHHHHHHCCCCCHHCEEEECCCCCCCEEEEEECCEEEECCH
RNSIKEIADYVTDTNNENGVAKVINKYILNKAI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MYKLIALDIDGTILNTQKRITPEVFESIQEAKRAGAKVVITTGRPLPGVKELLNQLNLTD
CEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCC
EGDYVICFNGAIIQEVKSEKIIHDVEMSLDDFDFIYNNVCKKYKTKIHINTMTNLITPNE
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEHHHEECCCC
TPGKYTLHEAKLNNIEVKYIQKDKIDESIKICKIMIVDEPERLEEIIQQLPKNLFNKYTI
CCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHEEE
VRSAPFYLEFLGKTTNKGTALKTLCTNLNIPIENAIAVGDEENDQHMIKYAGLGVAMGNA
EECCCHHHHHHCCCCCCCHHHHHHHHCCCCCHHCEEEECCCCCCCEEEEEECCEEEECCH
RNSIKEIADYVTDTNNENGVAKVINKYILNKAI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]