| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is grdA
Identifier: 126699969
GI number: 126699969
Start: 2721591
End: 2721929
Strand: Direct
Name: grdA
Synonym: CD2352
Alternate gene names: NA
Gene position: 2721591-2721929 (Clockwise)
Preceding gene: 126699968
Following gene: 126699975
Centisome position: 63.44
GC content: 38.05
Gene sequence:
>474_bases ATGAGTTTACTTAGTAATAAAAAGGTTCTTATAATAGGTGACCGTGATGGTATACCAGGACCTGCGATAGAAGAATGTGT AAAAACAGTAGAAGGAGCAGAGGTTGTTTTCTCATCTACAGAATGCTTTGTCTGAACAGCTGCTGGGGCTATGGACTTAG AAAATCAAAACAGAGTTAAAGATGCTGCTGATAAATTCGGAGCTGAAAATGTTGTGATTTTACTAGGTGCTGCTGAAGCC GAAGCTGCAGGTCTTGCAGCCGAAACAGTAACTGCTGGAGATCCAACTTTCGCTGGACCACTTGCTGGAGTTGCCTTAGG ATTAAGTGTTTACCACGTTGTTGAGGAACCAATAAAATCATTATTTGATGAAAGTGTATATGAAGACCAAATAAGTATGA TGGAAATGGTTTTAGAAGTTGAAGAAATAGAAGAAGAAATGTCTGGTATAAGAGAAGAATTTTGTAAATTTTAA
Upstream 100 bases:
>100_bases TTAAACGATTGAGTAATGTTAATAAAACATATTATAGATAATTATAATAAGTGTTATAGATATATAAAAATATATTAGAA ATATAATAAGGAGGATTATT
Downstream 100 bases:
>100_bases TGCCTAAAAGCAAAAGGGGTGAAACTAAGAGATGGGAAAACTAAAAGCAGTACATTATATTAATCAGTTCTTTGCTGGTA TAGGTGGAGAAGAAAAAGCT
Product: glycine/sarcosine/betaine reductase complex protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>156_residues MSLLSNKKVLIIGDRDGIPGPAIEECVKTVEGAEVVFSSTECFVTAAGAMDLENQNRVKDAADKFGAENVVILLGAAEAE AAGLAAETVTAGDPTFAGPLAGVALGLSVYHVVEEPIKSLFDESVYEDQISMMEMVLEVEEIEEEMSGIREEFCKF
Sequences:
>Translated_113_residues LKFTKFFSYTRHFFFYFFNF*NHFHHTYLVFIYTFIK**FYWFLNNVVNT*S*GNSSKWSSESWISSSYCFGCKTCSFGF SST**NHNIFSSEFISSIFNSVLIF*VHSPSSC >Mature_113_residues LKFTKFFSYTRHFFFYFFNF*NHFHHTYLVFIYTFIK**FYWFLNNVVNT*S*GNSSKWSSESWISSSYCFGCKTCSFGF SST**NHNIFSSEFISSIFNSVLIF*VHSPSSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12365; Mature: 12365
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LKFTKFFSYTRHFFFYFFNFNHFHHTYLVFIYTFIKFYWFLNNVVNTSGNSSKWSSESWI CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SSSYCFGCKTCSFGFSSTNHNIFSSEFISSIFNSVLIFVHSPSSC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA