Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is modB [H]

Identifier: 126699930

GI number: 126699930

Start: 2674009

End: 2674800

Strand: Direct

Name: modB [H]

Synonym: CD2312

Alternate gene names: 126699930

Gene position: 2674009-2674800 (Clockwise)

Preceding gene: 126699929

Following gene: 126699931

Centisome position: 62.33

GC content: 28.79

Gene sequence:

>792_bases
TTGAAAAATAAATTTTTTACTACACTACTTACTGGATTTTTTGCTATAGTCTTTTTGTTTATTGTATCACCACTTCTTAT
GTTAATCATTAAAGGGATAAGTTATGTTCCTATATGCTTAAAATCAGTGGAAGTACAGTATGCAATAACACTTAGTATTA
AAACATCTTTAATATCTACTATAGTATGCCTTTTATTAGCTATTCCAGTAGCATATTTTTTACATATTACTAAATTACCA
TTTAAAAAACTGATTATACAGATAATAAATCTCCCTATGTCTCTTCCACACTTAGTATCAGGAATTGCTCTTTTACTTTT
GTTTGGAAGAATGGGGATTGGAGATTCCATTTATAAGATTTTTAAGCTTGATTTTATATTTACAAAGCAAGGTATAGTTT
TAGCACAAGTATTTGTAAATCTTCCACTTACTATTAAAATACTTCACACTTCACTAAATGAAAGTAATGAAAAGATGATA
TTTGTTGCACGTACCCTTGGATGTAATAGTTGGGAAGCATTTAGATTTATAATTCTTCCAAATCTAAAAACTGGAATCAT
ATCTGCAACTGTAATGACTTGGTCAAGAGCACTTGGTGAATTTGGTGCAGTAGCTATGATAGCAGGTTCTACACGTATGA
AAACTGAAATTATTCCTACATCTATATATTTAAATATGTCTACTGGTGATATAGACATTGCAATCGGAATAGCTGTAATT
TTGATATTTATCTCACTTACATGCTTGATGCTTTTTGAGATATTTTTTAATAGAGAGGTTGATAAGAATTAA

Upstream 100 bases:

>100_bases
AAAAGATTTAGCTAATAAATTTATAAATTATATAGAGTCAGACGAAGCTAAACAGATATTTAAAAAATATGGTTTTGAAC
CTGTTAAGTAGTGATTAAAC

Downstream 100 bases:

>100_bases
TATGTTAAAAATAAAAAATTTATCTCTTGATTTACCTAATTTTAAATTACAAGAAAATAGTTTAAATATTAATAATCATG
AATACTTTGTTTTATTAGGA

Product: ABC transporter permease

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPVAYFLHITKLP
FKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMI
FVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI
LIFISLTCLMLFEIFFNREVDKN

Sequences:

>Translated_263_residues
MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPVAYFLHITKLP
FKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMI
FVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI
LIFISLTCLMLFEIFFNREVDKN
>Mature_263_residues
MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPVAYFLHITKLP
FKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMI
FVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI
LIFISLTCLMLFEIFFNREVDKN

Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0555

COG function: function code O; ABC-type sulfate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788764, Length=198, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082099, Length=194, Percent_Identity=29.3814432989691, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786980, Length=216, Percent_Identity=33.7962962962963, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1786254, Length=205, Percent_Identity=26.3414634146341, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29323; Mature: 29323

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLIST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEEHHHHHHHH
IVCLLLAIPVAYFLHITKLPFKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
FKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMIFVARTLGCNSWEAFRFIILP
HHHHHEEECCCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEC
NLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEEEEEECCCCCHHHHHHHHH
LIFISLTCLMLFEIFFNREVDKN
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLIST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEEHHHHHHHH
IVCLLLAIPVAYFLHITKLPFKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
FKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMIFVARTLGCNSWEAFRFIILP
HHHHHEEECCCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEC
NLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEEEEEECCCCCHHHHHHHHH
LIFISLTCLMLFEIFFNREVDKN
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]