| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is crp [C]
Identifier: 126699786
GI number: 126699786
Start: 2510369
End: 2511097
Strand: Direct
Name: crp [C]
Synonym: CD2170
Alternate gene names: 126699786
Gene position: 2510369-2511097 (Clockwise)
Preceding gene: 126699780
Following gene: 126699796
Centisome position: 58.51
GC content: 29.63
Gene sequence:
>729_bases ATGAAAACAAATTATCGGTTGCATATGCAACAAGGAAGTGATTATTTGAAAAAATTTTTAGAAAAGCATATAGACCTACT TAAAAAAATTCCTCTATTTGAAGGAATTAAAAGTGATGAACTTGAAGAAATGTTGGAATGTTTAGGTGTTGTAGATAAAA CTTACCCAAAAGATAGTATAATATTCTCTGTTGGAAGTGAAGTTACTTCTATTGGAATTATGCTTAAAGGAAGTGCTCAT ATAATAAAGGAAGATATCGAAGGGAATAGGAATATTGTAGCTGAACTCTTGCCTGGAGATTTATTTGGAGAGGTATTCGC ATGTACTAGACTACATAAAAGTAATGTTACAGTAACCACAACATCTTCTTGCGAAGTTTTATTTATAAAGTTTAAAAGTG TAACTGGTATTTGTTCATCTACATGTGTATTTCATAATAGGCTTGTTGAAAATATGCTACAATTAATAGCTGAAAAAAAC ATTTTACTTCACAATAAAATAGAATTACTTTCTCGTAAAACAACTCGCGAGAAATTGCTTATGTATTTTTCAAAACAGAT AGAACAAACAGGTAGCCACCAGTTTACAATTCCCTTTTCAAGAAATGAAATGGCTGATTTTTTATGTGTTGACAGAAGTT CTATGTCAAGAGAGCTTGGCAAGATGCGAGATGAAGGCTTGTTATCTTTTAACAAAAATAAATTTGAAATCTTTTATTTT AAAAAATAA
Upstream 100 bases:
>100_bases TTTCTTATATATTTATTTTTAATACCTATATTTCTTTATTTCAAATTTCTTGTAGTAGGATTTTTATATCCCCTTGCTTT TATAAACTTAGTATAGTACA
Downstream 100 bases:
>100_bases AATAGATATTTAAACATATTTATTTCAATATATACTATATTAGTTGATTCAAATTATAAATATCATATTTGAATCTTAAA TTTATATTTTTACTTAAAAA
Product: cNMP-binding regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator Crp Family; Crp/Fnr Family Transcriptional Regulator; CAMP-Regulatory Protein; Regulatory Protein; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKTNYRLHMQQGSDYLKKFLEKHIDLLKKIPLFEGIKSDELEEMLECLGVVDKTYPKDSIIFSVGSEVTSIGIMLKGSAH IIKEDIEGNRNIVAELLPGDLFGEVFACTRLHKSNVTVTTTSSCEVLFIKFKSVTGICSSTCVFHNRLVENMLQLIAEKN ILLHNKIELLSRKTTREKLLMYFSKQIEQTGSHQFTIPFSRNEMADFLCVDRSSMSRELGKMRDEGLLSFNKNKFEIFYF KK
Sequences:
>Translated_242_residues MKTNYRLHMQQGSDYLKKFLEKHIDLLKKIPLFEGIKSDELEEMLECLGVVDKTYPKDSIIFSVGSEVTSIGIMLKGSAH IIKEDIEGNRNIVAELLPGDLFGEVFACTRLHKSNVTVTTTSSCEVLFIKFKSVTGICSSTCVFHNRLVENMLQLIAEKN ILLHNKIELLSRKTTREKLLMYFSKQIEQTGSHQFTIPFSRNEMADFLCVDRSSMSRELGKMRDEGLLSFNKNKFEIFYF KK >Mature_242_residues MKTNYRLHMQQGSDYLKKFLEKHIDLLKKIPLFEGIKSDELEEMLECLGVVDKTYPKDSIIFSVGSEVTSIGIMLKGSAH IIKEDIEGNRNIVAELLPGDLFGEVFACTRLHKSNVTVTTTSSCEVLFIKFKSVTGICSSTCVFHNRLVENMLQLIAEKN ILLHNKIELLSRKTTREKLLMYFSKQIEQTGSHQFTIPFSRNEMADFLCVDRSSMSRELGKMRDEGLLSFNKNKFEIFYF KK
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27810; Mature: 27810
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNYRLHMQQGSDYLKKFLEKHIDLLKKIPLFEGIKSDELEEMLECLGVVDKTYPKDSI CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCE IFSVGSEVTSIGIMLKGSAHIIKEDIEGNRNIVAELLPGDLFGEVFACTRLHKSNVTVTT EEECCCCHHEEEEEEECCHHHHHHHCCCCCCEEEHHCCCHHHHHHHHHHHHHCCCEEEEE TSSCEVLFIKFKSVTGICSSTCVFHNRLVENMLQLIAEKNILLHNKIELLSRKTTREKLL CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MYFSKQIEQTGSHQFTIPFSRNEMADFLCVDRSSMSRELGKMRDEGLLSFNKNKFEIFYF HHHHHHHHHCCCEEEEEECCCCCHHHHHEECHHHHHHHHHHHHHCCCEEECCCEEEEEEE KK EC >Mature Secondary Structure MKTNYRLHMQQGSDYLKKFLEKHIDLLKKIPLFEGIKSDELEEMLECLGVVDKTYPKDSI CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCE IFSVGSEVTSIGIMLKGSAHIIKEDIEGNRNIVAELLPGDLFGEVFACTRLHKSNVTVTT EEECCCCHHEEEEEEECCHHHHHHHCCCCCCEEEHHCCCHHHHHHHHHHHHHCCCEEEEE TSSCEVLFIKFKSVTGICSSTCVFHNRLVENMLQLIAEKNILLHNKIELLSRKTTREKLL CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MYFSKQIEQTGSHQFTIPFSRNEMADFLCVDRSSMSRELGKMRDEGLLSFNKNKFEIFYF HHHHHHHHHCCCEEEEEECCCCCHHHHHEECHHHHHHHHHHHHHCCCEEECCCEEEEEEE KK EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA