| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699530
Identifier: 126699530
GI number: 126699530
Start: 2220755
End: 2221384
Strand: Direct
Name: 126699530
Synonym: CD1920
Alternate gene names: NA
Gene position: 2220755-2221384 (Clockwise)
Preceding gene: 126699529
Following gene: 126699531
Centisome position: 51.76
GC content: 32.06
Gene sequence:
>630_bases ATGGAGAATCTATTAAATGAAATAGTGGAAGAAGTAATAACTAGAGTTAAAAAAGAAGCATTTATAGAAGTTGAAGCATC AGGAAGACACGTTCACTTAAGTAGAGAAGATGTCGATAAATTATTTGGAGAAGGATATACTCTTACAAAACTAAAAGACC TATCTCAACCAGGTCAATATGCATGTAAGGAAAGAGTTACAATAACTGGTCCTAAAGGAAGTATAAAAAATGTAGTTGTA CTTGGACCATGTAGAAATGAAACTCAGGTAGAAATATCTTTAACAGATGGTTCAACTCTTGGACTAAAAGCTCCTATAAA ACAAAGTGGAGACTTAGAAGGTACTTTAAGTATTAAAATATCAACACAATATGGTGAAGTTGAACTTGATAAGGGGCTAA TGGTTGCTAAAAGACATATACACATGACTCCTAAAGATGCTGAAAAATTCAATGTATGTGATAAAGAGATAGTTGAAGCT AAGGTGATGGGTCAAAGACCTTTAACATTTGATGATGTAGTAATAAGAGTGAGTGACAGTTTTAAAACTTATATGCATAT AGACTATGATGAAGCCAATGCATGTGGTTATTCAAAAGGAACTGTTGCTAAAATAATAAAGAAAGCATAA
Upstream 100 bases:
>100_bases CAGAGAAGATTTAATAAAGGCACTTAATAGATTATCGTCAGTATTTTGGATAATGATATATAAGGTTAGAACTAATAAGT ATAAGTAGTTGGAGGACATA
Downstream 100 bases:
>100_bases ATTTAACCTACTATATAAATTACCTCTAGGGAGGATTTAATATGAATTATGATAACCTTGTAGATTTAATAACGGAAGAA ATCTATAAAAAAATAAATAG
Product: propanediol/ethanolamine utilization protein
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Propanediol/Ethanolamine Utilization Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol Utilization; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQYACKERVTITGPKGSIKNVVV LGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKISTQYGEVELDKGLMVAKRHIHMTPKDAEKFNVCDKEIVEA KVMGQRPLTFDDVVIRVSDSFKTYMHIDYDEANACGYSKGTVAKIIKKA
Sequences:
>Translated_209_residues MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQYACKERVTITGPKGSIKNVVV LGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKISTQYGEVELDKGLMVAKRHIHMTPKDAEKFNVCDKEIVEA KVMGQRPLTFDDVVIRVSDSFKTYMHIDYDEANACGYSKGTVAKIIKKA >Mature_209_residues MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQYACKERVTITGPKGSIKNVVV LGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKISTQYGEVELDKGLMVAKRHIHMTPKDAEKFNVCDKEIVEA KVMGQRPLTFDDVVIRVSDSFKTYMHIDYDEANACGYSKGTVAKIIKKA
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23188; Mature: 23188
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQY CHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHCCCEEEEHHHHCCCCCHH ACKERVTITGPKGSIKNVVVLGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKI HHHCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCEECEECCCCCCCCCCEEEEEEE STQYGEVELDKGLMVAKRHIHMTPKDAEKFNVCDKEIVEAKVMGQRPLTFDDVVIRVSDS ECCCCCEEECCCEEEEHEEEECCCCCCHHHCCCHHHHHHHHHCCCCCCCHHHEEEEEECC FKTYMHIDYDEANACGYSKGTVAKIIKKA CEEEEEEECCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQY CHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHCCCEEEEHHHHCCCCCHH ACKERVTITGPKGSIKNVVVLGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKI HHHCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCEECEECCCCCCCCCCEEEEEEE STQYGEVELDKGLMVAKRHIHMTPKDAEKFNVCDKEIVEAKVMGQRPLTFDDVVIRVSDS ECCCCCEEECCCEEEEHEEEECCCCCCHHHCCCHHHHHHHHHCCCCCCCHHHEEEEEECC FKTYMHIDYDEANACGYSKGTVAKIIKKA CEEEEEEECCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA