| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is adhE [H]
Identifier: 126699527
GI number: 126699527
Start: 2218012
End: 2219481
Strand: Direct
Name: adhE [H]
Synonym: CD1917
Alternate gene names: 126699527
Gene position: 2218012-2219481 (Clockwise)
Preceding gene: 126699526
Following gene: 126699528
Centisome position: 51.7
GC content: 31.7
Gene sequence:
>1470_bases ATGACACTTTTAGATAAAGATTTAGTATCTATACAAGAAGTAAGAACTCTTGTAAGAAGATCTAAAGTGGCTCAAGAGAA ACTTTCTAAAATGAGTCAAGAGCAAATAGATAAAATAGTAAAAGCTGTTGTAGATGCAGCATTTAATAATGCTACTAAAT TAGCTAAAATGGCAAATGAAGAAACTGGATTTGGAAAATGGGAAGATAAAGTAATTAAAAATACTTTTGCATCTATGGGA GTTTATGAAACTTTAAAGAACACAAAAACTATTGGAATAATTGGTGAAGATAAGGAAGCCAATACGATAGATATAGCTAC ACCAGTTGGAGTTGTGGCAGGTCTTATACCTTCAACAAACCCAACATCAACAGTAATATACAAAACTATAATATCTCTAA AAGCAGGAAATACTATAGTTTTCTCTCCACATCCAAATGCAAAAAACTGCATACTTGAAACAGTTAATATAATAAGTGAT GCTGCTATAAAGGCTGGAGCTCCAGAGGATTCAATATTATGTATAACTAATCCAAGTATAGTTGGAACCAATGAATTGAT GAAACATAAAGATACAAACTTAATACTAGCAACTGGAGGAGAAGCAATGGTTAGAGCTGCTTACTCTTCAGGAACACCAG CTATTGGAGTTGGACCAGGAAATGGACCAGCATTTATAGATAAATCAGCAAATGTTAAATTAGCAATCAAAAGAATAATA GATTCTAAAACTTTTGATAATGGTGTTATATGTGCATCAGAACAATCTATAGTAATAGAAAAATCTATGGAAGAAACTGT TTTAAAAGAGCTTAAAAATCAAGGTGCATATGTTTTAAATGAAGAGGAAAGTGAAAGATTAGCAAAATTCATATTAAGAG CTAATGGTACTATGAATCCACAAATAGTTGGTAAAAGTGTTGAGGTAATAGCAAATTTAGCAGACTTAACAAATGTACCT AAAAATACAAAAGTTCTAGTTGCAAGAGAAAATAAAGTTGGTCACAATGTAGCCTATTCAAGAGAAAAACTTACACCAAT ACTAGCGTTCTATGTTGAAGAAAATGTAGAAGCTATTATGAACAGATGCAGAGAAATATTGTTAAATGAAGGTGCAGGTC ATACATTCTCAATGCATGTAAATGATGAAGAATTGGTAAAAAGATTTGCCCTTAATATGCCAGTATCAAGAATACTTGTG AATACTCCTTCAGCACTTGGAGGAATAGGTGCATCAACAAACCTTGTACCAGCACTAACACTTGGTTGTGGTGCAATAGG TGGAAGTTCAACTTCAAACAATATAGGACCACTTGATTTAATAAATGTTAAAAGAGTAGCTTATGGAATCAAAGAAATAG AAGAACTTGGAAGAGATAAATCTCAAGTTGAAAAATCAATGTTTGACTCAATGGATAAAGAAGAATTAATAAATCTTCTT GTTCAAAAACTATTCAAAGAACTAGCATAA
Upstream 100 bases:
>100_bases AGAAATTAGATTCTTCAATAACTTATAAAGATTTAAATGTTCTTAAAAAAGAAGAATTAATAAACTTAGTTAAAAAGCTT AGTAGAAGGGATAGATAGTT
Downstream 100 bases:
>100_bases CTAAAATAAACAATGAAACTTATGGCTATCGCTATAAATTTCTAAAAATATAAACTATAAAATTAAATTTTTGGAGGATA AGATTATGGCAAGTGCAAAC
Product: ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANEETGFGKWEDKVIKNTFASMG VYETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTNPTSTVIYKTIISLKAGNTIVFSPHPNAKNCILETVNIISD AAIKAGAPEDSILCITNPSIVGTNELMKHKDTNLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSANVKLAIKRII DSKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLNEEESERLAKFILRANGTMNPQIVGKSVEVIANLADLTNVP KNTKVLVARENKVGHNVAYSREKLTPILAFYVEENVEAIMNRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILV NTPSALGGIGASTNLVPALTLGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLL VQKLFKELA
Sequences:
>Translated_489_residues MTLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANEETGFGKWEDKVIKNTFASMG VYETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTNPTSTVIYKTIISLKAGNTIVFSPHPNAKNCILETVNIISD AAIKAGAPEDSILCITNPSIVGTNELMKHKDTNLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSANVKLAIKRII DSKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLNEEESERLAKFILRANGTMNPQIVGKSVEVIANLADLTNVP KNTKVLVARENKVGHNVAYSREKLTPILAFYVEENVEAIMNRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILV NTPSALGGIGASTNLVPALTLGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLL VQKLFKELA >Mature_488_residues TLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANEETGFGKWEDKVIKNTFASMGV YETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTNPTSTVIYKTIISLKAGNTIVFSPHPNAKNCILETVNIISDA AIKAGAPEDSILCITNPSIVGTNELMKHKDTNLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSANVKLAIKRIID SKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLNEEESERLAKFILRANGTMNPQIVGKSVEVIANLADLTNVPK NTKVLVARENKVGHNVAYSREKLTPILAFYVEENVEAIMNRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILVN TPSALGGIGASTNLVPALTLGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLLV QKLFKELA
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=445, Percent_Identity=46.5168539325843, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1788797, Length=381, Percent_Identity=32.2834645669291, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 52780; Mature: 52648
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC ETGFGKWEDKVIKNTFASMGVYETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCHHHHHHHCCCCCC PTSTVIYKTIISLKAGNTIVFSPHPNAKNCILETVNIISDAAIKAGAPEDSILCITNPSI CCHHHHHHHHHHEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC VGTNELMKHKDTNLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSANVKLAIKRII CCCHHHHHCCCCCEEEEECCHHHHEEHHCCCCCEEEECCCCCCEEEECCCCHHHHHHHHH DSKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLNEEESERLAKFILRANGTMNP CCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCH QIVGKSVEVIANLADLTNVPKNTKVLVARENKVGHNVAYSREKLTPILAFYVEENVEAIM HHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILVNTPSALGGIGASTNLVPALT HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCHHHHEEECCHHHCCCCCCCCCHHHHH LGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLL HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH VQKLFKELA HHHHHHHCC >Mature Secondary Structure TLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC ETGFGKWEDKVIKNTFASMGVYETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTN CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCHHHHHHHCCCCCC PTSTVIYKTIISLKAGNTIVFSPHPNAKNCILETVNIISDAAIKAGAPEDSILCITNPSI CCHHHHHHHHHHEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC VGTNELMKHKDTNLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSANVKLAIKRII CCCHHHHHCCCCCEEEEECCHHHHEEHHCCCCCEEEECCCCCCEEEECCCCHHHHHHHHH DSKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLNEEESERLAKFILRANGTMNP CCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCH QIVGKSVEVIANLADLTNVPKNTKVLVARENKVGHNVAYSREKLTPILAFYVEENVEAIM HHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILVNTPSALGGIGASTNLVPALT HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCHHHHEEECCHHHCCCCCCCCCHHHHH LGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLL HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH VQKLFKELA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]