| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699472
Identifier: 126699472
GI number: 126699472
Start: 2154904
End: 2155710
Strand: Direct
Name: 126699472
Synonym: CD1861
Alternate gene names: NA
Gene position: 2154904-2155710 (Clockwise)
Preceding gene: 126699471
Following gene: 126699473
Centisome position: 50.23
GC content: 31.23
Gene sequence:
>807_bases ATGCGTACAGGCAATGAATTTAACGGTGTTGAGGATACTTTATATATACCTTTAGCTGCCAGAATATATGTATCTGAAAA ATTCCCACATTTTTTCTATGATGAAAAGGCTCTATCTTTGAAACCCAAGATTCCAACAGGCGGTATAGATAACAATAGTA CGGAATATTTTTATATGGCTAGTGTTTGTAGACAACAGACCATAGATATGAAAATTAAAAAATTCCTTGATGAAAATAAA AAGGGAAATGTGGTATTCTTAGGAGCAGGTTTAGAGACTTCATATAATCGCATAGGAAATCAAATTGTAAATTTCTATCA AGTAGATCTTCCGGGTGTAATAGAAGTACGAAAAAGAGTGCTTGGAAATGCTAAAAATGAGAAACTTATATCAGGAGATA TGTTTGACCTTAACTGGATTAAAGAAATAGATACTTCATTGCCGACACTTATTTCTGTAGCAGGTGTATATCAGTATTTT GACGAATATAAAATTATAGATATGATTCAAAAATTGAAAGCTCAATTTTCTAAGGGAGAATTGATATTTGACGCAACAAA CTCTAAAGGTTTGAAGCTTGCTAATAAATATGTGAAGAAAACAGGAAATAAAAATGCACAAATGTATTTTAGTGTTGATA ATTCTAAAGATTTAGCAGATAAGACTGGAACAATACTATTGGAAGTTGATGGATTTTTTCATGGAGCATTGAAGGCTTGT CAGGGATTAAAACTAATGACGAGGTTATATATGTATTTTGCAGATAAGTTGCATCGAACATTGGTTATACATTTGAGGTT TAATTAA
Upstream 100 bases:
>100_bases CTTTGTGCATCAAAAAATGAGTGAAGTAGTCCATGTGGAAACAATAATAAAATAAAAGTGTTTCAATTTAGTAATATACT ATGAAAGGAGATGAAAAGAA
Downstream 100 bases:
>100_bases ATTCTATTCAATTAGTTCTTATTACTTGTATTCAACGTATAATATATAGAATCAAAAGGTGGTTAGAGAAAATCTAATTG CCTTTTTTATTTGTAAAAAA
Product: conjugative transposon O-methyltransferase
Products: NA
Alternate protein names: O-Methyltransferase Domain Protein; Polyketide Synthesis O-Methyltransferase; O-Methyltransferase; Polyketide Methyltransferase; Leucine Carboxyl Methyltransferase; Polyketide Synthase Protein; O-Methyltransferase Involved In Polyketide Biosynthesis; O-Methyltransferase OMT; O-Methyltransferase N-Terminus Family Protein; Conjugative Transposon O-Methyltransferase; TcmP Protein; Methyltransferase; Polyketide Synthesis O-Methyltransferase TcmP Type Protein; O-Methyltransferase-Like; Tetracenomycin C Synthesis Protein; O-Methyltransferase-Like Protein; Polyketide Synthase O-Methyltransferase; O-Methyltransferase OmT; Polyketide Biosynthesis O-Methyltransferase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MRTGNEFNGVEDTLYIPLAARIYVSEKFPHFFYDEKALSLKPKIPTGGIDNNSTEYFYMASVCRQQTIDMKIKKFLDENK KGNVVFLGAGLETSYNRIGNQIVNFYQVDLPGVIEVRKRVLGNAKNEKLISGDMFDLNWIKEIDTSLPTLISVAGVYQYF DEYKIIDMIQKLKAQFSKGELIFDATNSKGLKLANKYVKKTGNKNAQMYFSVDNSKDLADKTGTILLEVDGFFHGALKAC QGLKLMTRLYMYFADKLHRTLVIHLRFN
Sequences:
>Translated_268_residues MRTGNEFNGVEDTLYIPLAARIYVSEKFPHFFYDEKALSLKPKIPTGGIDNNSTEYFYMASVCRQQTIDMKIKKFLDENK KGNVVFLGAGLETSYNRIGNQIVNFYQVDLPGVIEVRKRVLGNAKNEKLISGDMFDLNWIKEIDTSLPTLISVAGVYQYF DEYKIIDMIQKLKAQFSKGELIFDATNSKGLKLANKYVKKTGNKNAQMYFSVDNSKDLADKTGTILLEVDGFFHGALKAC QGLKLMTRLYMYFADKLHRTLVIHLRFN >Mature_268_residues MRTGNEFNGVEDTLYIPLAARIYVSEKFPHFFYDEKALSLKPKIPTGGIDNNSTEYFYMASVCRQQTIDMKIKKFLDENK KGNVVFLGAGLETSYNRIGNQIVNFYQVDLPGVIEVRKRVLGNAKNEKLISGDMFDLNWIKEIDTSLPTLISVAGVYQYF DEYKIIDMIQKLKAQFSKGELIFDATNSKGLKLANKYVKKTGNKNAQMYFSVDNSKDLADKTGTILLEVDGFFHGALKAC QGLKLMTRLYMYFADKLHRTLVIHLRFN
Specific function: Unknown
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30617; Mature: 30617
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGNEFNGVEDTLYIPLAARIYVSEKFPHFFYDEKALSLKPKIPTGGIDNNSTEYFYMA CCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEECCCCEEECCCCCCCCCCCCCCCEEEHH SVCRQQTIDMKIKKFLDENKKGNVVFLGAGLETSYNRIGNQIVNFYQVDLPGVIEVRKRV HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCHHHHHHHH LGNAKNEKLISGDMFDLNWIKEIDTSLPTLISVAGVYQYFDEYKIIDMIQKLKAQFSKGE HCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LIFDATNSKGLKLANKYVKKTGNKNAQMYFSVDNSKDLADKTGTILLEVDGFFHGALKAC EEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHH QGLKLMTRLYMYFADKLHRTLVIHLRFN CCHHHHHHHHHHHHHHHCEEEEEEEEEC >Mature Secondary Structure MRTGNEFNGVEDTLYIPLAARIYVSEKFPHFFYDEKALSLKPKIPTGGIDNNSTEYFYMA CCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEECCCCEEECCCCCCCCCCCCCCCEEEHH SVCRQQTIDMKIKKFLDENKKGNVVFLGAGLETSYNRIGNQIVNFYQVDLPGVIEVRKRV HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCHHHHHHHH LGNAKNEKLISGDMFDLNWIKEIDTSLPTLISVAGVYQYFDEYKIIDMIQKLKAQFSKGE HCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LIFDATNSKGLKLANKYVKKTGNKNAQMYFSVDNSKDLADKTGTILLEVDGFFHGALKAC EEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHH QGLKLMTRLYMYFADKLHRTLVIHLRFN CCHHHHHHHHHHHHHHHCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA