Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126699467

Identifier: 126699467

GI number: 126699467

Start: 2149848

End: 2150081

Strand: Direct

Name: 126699467

Synonym: CD1857A

Alternate gene names: NA

Gene position: 2149848-2150081 (Clockwise)

Preceding gene: 126699466

Following gene: 126699468

Centisome position: 50.11

GC content: 28.21

Gene sequence:

>234_bases
TTGAAAAAAGAACTGACAGCAGTAAAAAATAGAATAAAGAAATTGAAAGATAAAAAGGCTCTGATTGATGAAGAATTGGA
GCCTTTGTTCATTCGTGAAGAAGAACTTGAAAACGAAGAAATTATTGCCATTTGCAGAAAAAATAACATTACAATTTCTG
ATCTTATGGTAAAAGTAAACAGAGAAAAATCAGAAATGAAAAAGGAGAACGGAAATGAAAAAAATGAAGAATAA

Upstream 100 bases:

>100_bases
TGATACATGCAGGGGATCCTATTCAATATACTTCTATTAACTCACCATATTGGAGAGAACATTTTTATGGGTTTGGAAGA
CCAAGATAGGAGGATACAAT

Downstream 100 bases:

>100_bases
AAAGGCTGCGGGAGTAATTCTTGGAGCAGTGCTTTTGATAGTGGGAGTAGTAATCTCTTTATTTGCAGGTAGTAAGATTG
TATTTGCACAAGGAGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKKELTAVKNRIKKLKDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMVKVNREKSEMKKENGNEKNEE

Sequences:

>Translated_77_residues
MKKELTAVKNRIKKLKDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMVKVNREKSEMKKENGNEKNEE
>Mature_77_residues
MKKELTAVKNRIKKLKDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMVKVNREKSEMKKENGNEKNEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9144; Mature: 9144

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKELTAVKNRIKKLKDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMVKVN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHCCCCEEEEEECCCCCCHHHHHHHHC
REKSEMKKENGNEKNEE
CCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKELTAVKNRIKKLKDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMVKVN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHCCCCEEEEEECCCCCCHHHHHHHHC
REKSEMKKENGNEKNEE
CCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA