| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699455
Identifier: 126699455
GI number: 126699455
Start: 2138111
End: 2138629
Strand: Direct
Name: 126699455
Synonym: CD1846
Alternate gene names: NA
Gene position: 2138111-2138629 (Clockwise)
Preceding gene: 126699454
Following gene: 126699456
Centisome position: 49.84
GC content: 30.06
Gene sequence:
>519_bases ATGCGAGTATACGAAAATAAAGAAGAACTCAAAAGTGAAATAAATAAAACATTTGAGAAGTATATTGCAGAATTTGATAA TATTCCAGAAAGCTTAAAAGATAAAAGAATTGATGAAGTTGACAGAACGCCGGCAGAAAATCTTGCCTATCAGGTGGGAT GGACAACTTTAGTTCTTAAATGGGAAGAAGATGAAAGAAATGGGCTTCAAGTAAAGACACCATCGGATGAATTCAAATGG AATCAACTTGGTGAATTATATCAATGGTTCACAGATACTTACGCTTATTTATCATTGCAAGAGTTAAAATCTAAATTAAA TGAAAATATTAATTCTATATATGTAATGATTGATTCATTAAGTGATGAAGAATTATTTAAACCACATATGAGAAAATGGG CTGATGATGCGACTAAAACAGCAGTGTGGGAAGTTTATAAGTTTATTCATGTGAATACTGTAGCTCCTTTTAAAACTTTC AGGAACAAAATTAGAAAATGGAAGAAAATAGTATTATAA
Upstream 100 bases:
>100_bases GTTGGAGCGTCAATTATAGCATTATTGCAAGGTATAAACGAGAAAATAATGTCAGTTTAAATCAGAGAATTGATAAATCA GAAGTTGTGGAGGTAATTTT
Downstream 100 bases:
>100_bases ATTACAGACAGTAAAGTTAAAAATTTCATAAATGGGTTATCAAAGGCGATAGAAAAACTATCGTCTTTTTATTTGAAAAA AGAAAGGAGTGTTTGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRVYENKEELKSEINKTFEKYIAEFDNIPESLKDKRIDEVDRTPAENLAYQVGWTTLVLKWEEDERNGLQVKTPSDEFKW NQLGELYQWFTDTYAYLSLQELKSKLNENINSIYVMIDSLSDEELFKPHMRKWADDATKTAVWEVYKFIHVNTVAPFKTF RNKIRKWKKIVL
Sequences:
>Translated_172_residues MRVYENKEELKSEINKTFEKYIAEFDNIPESLKDKRIDEVDRTPAENLAYQVGWTTLVLKWEEDERNGLQVKTPSDEFKW NQLGELYQWFTDTYAYLSLQELKSKLNENINSIYVMIDSLSDEELFKPHMRKWADDATKTAVWEVYKFIHVNTVAPFKTF RNKIRKWKKIVL >Mature_172_residues MRVYENKEELKSEINKTFEKYIAEFDNIPESLKDKRIDEVDRTPAENLAYQVGWTTLVLKWEEDERNGLQVKTPSDEFKW NQLGELYQWFTDTYAYLSLQELKSKLNENINSIYVMIDSLSDEELFKPHMRKWADDATKTAVWEVYKFIHVNTVAPFKTF RNKIRKWKKIVL
Specific function: Unknown
COG id: COG4283
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320749, Length=171, Percent_Identity=54.3859649122807, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20698; Mature: 20698
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYENKEELKSEINKTFEKYIAEFDNIPESLKDKRIDEVDRTPAENLAYQVGWTTLVLK CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEE WEEDERNGLQVKTPSDEFKWNQLGELYQWFTDTYAYLSLQELKSKLNENINSIYVMIDSL ECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECC SDEELFKPHMRKWADDATKTAVWEVYKFIHVNTVAPFKTFRNKIRKWKKIVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVYENKEELKSEINKTFEKYIAEFDNIPESLKDKRIDEVDRTPAENLAYQVGWTTLVLK CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEE WEEDERNGLQVKTPSDEFKWNQLGELYQWFTDTYAYLSLQELKSKLNENINSIYVMIDSL ECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECC SDEELFKPHMRKWADDATKTAVWEVYKFIHVNTVAPFKTFRNKIRKWKKIVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA