| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is aroA
Identifier: 126699443
GI number: 126699443
Start: 2123357
End: 2124670
Strand: Direct
Name: aroA
Synonym: CD1834
Alternate gene names: 126699443
Gene position: 2123357-2124670 (Clockwise)
Preceding gene: 126699442
Following gene: 126699444
Centisome position: 49.49
GC content: 29.98
Gene sequence:
>1314_bases ATGGGAAGTCTAAAAATATATCCAAGTAAATTATCTGGAGATGTAAAAATACCACCATCAAAAAGTATGGCACATAGGGC AGTTATTTGTTCATCTCTAAGCAATGGAAAAAGTAGAATTTCTAATATAGATTTTTCTGATGATATAATAGCTACTATAA GAGCAATGACATCATTAGGAGCTATTATAGAAAAGAAAGAAGATATTTTAGAAATTTCGGGAATTTTTTCTAAAGAAGGT ATTTTAAATAGAGAGAATCAGTTGAATCAACCTAAATTGACAATAGATTGTAATGAATCAGGCTCTACATTGAGATTTTT AGTACCTATATCTTTAGCATTTGATGGTGTAAAAAGGTTTATAGGTAGAGGAAATCTTGGAAAAAGACCACTTGATACTT ATTATGAGATATTTGACAGACAGAATATAAAATATAGTTACAAAGAAAATCAGTTAGATTTGATTATATCAGGTAAGCTT AAACCAGATGAATTTAGAGTAAAAGGAAATATAAGTTCTCAGTTTATCACAGGTTTACTGTTTATATTGCCTACGCTAGA GAGTGATTCAAAGATAATAATTACTACTGAGCTAGAATCTAAAGGATATTTAGATTTAACTCTTTCAACGATAAAAGATT TTGGGGTAGAAATTATAAACAATAACTATAAAGAATTTATTATAAAAGGAAATCAAACGTATAAAGCGAGAGATTATAAA GTAGAAGGAGATTATTCTCAAGGAGCATTTTATTTATCAGCAGATGCTATAGGAGAAGATATTAGCATATTAGACCTTAA AGAAGATTCTCTTCAAGGGGATAGTGAAGTAGTTGAAATTTTATCTAGGATGGGAATGGAAATATTAAGAGAAGGCAACA AAATAAAAGGAATAACAAATGGTTTAAATGGTACTTTGATAGATGCATCTCAATGCCCAGATATAATACCTGTATTATCT GTAGTAGCATCCTTAAGTATAGGGAAGACTACAATAATTAATGCTGGTAGGCTTAGAATTAAAGAATGTGATAGACTTCA TGCAATAAATGTTGAGTTAAGTAAACTTGGAGCAAATATAGAGGAGAAAGAGGATAGTTTGATAATCGAAGGAGTAAGCA AGTTAAATGGTGGAGTAGAGGTGTGGAGTCACAAAGACCATAGAATTGCTATGACACTTGCAATTGCTTCTTGTAGATGT GATAAACCAATAATATTAAAAGATTTTGAGTGTGTATCAAAATCTTATCCACATTTTTTTAAAGATTTTAAGATGTTAGG AGGTCGAATTGATGAGTGGAATATGGGGAAATAA
Upstream 100 bases:
>100_bases AAAAAAATCTAGGTGATACATTAAAAATAATACTTTTAAAAGATATTGGAGAGAGTATTATATATAATACTACTTCTAAA TTTTTTCAGGAGGTAAGATA
Downstream 100 bases:
>100_bases TTTAAAAGTATCAATTTTTGGAGAATCTCATGGAAATGCTATAGGTATAAATATAGATGGTCTTCCTTCGGGGATTGAAC TTGACCTTGATAAGATTGAT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MGSLKIYPSKLSGDVKIPPSKSMAHRAVICSSLSNGKSRISNIDFSDDIIATIRAMTSLGAIIEKKEDILEISGIFSKEG ILNRENQLNQPKLTIDCNESGSTLRFLVPISLAFDGVKRFIGRGNLGKRPLDTYYEIFDRQNIKYSYKENQLDLIISGKL KPDEFRVKGNISSQFITGLLFILPTLESDSKIIITTELESKGYLDLTLSTIKDFGVEIINNNYKEFIIKGNQTYKARDYK VEGDYSQGAFYLSADAIGEDISILDLKEDSLQGDSEVVEILSRMGMEILREGNKIKGITNGLNGTLIDASQCPDIIPVLS VVASLSIGKTTIINAGRLRIKECDRLHAINVELSKLGANIEEKEDSLIIEGVSKLNGGVEVWSHKDHRIAMTLAIASCRC DKPIILKDFECVSKSYPHFFKDFKMLGGRIDEWNMGK
Sequences:
>Translated_437_residues MGSLKIYPSKLSGDVKIPPSKSMAHRAVICSSLSNGKSRISNIDFSDDIIATIRAMTSLGAIIEKKEDILEISGIFSKEG ILNRENQLNQPKLTIDCNESGSTLRFLVPISLAFDGVKRFIGRGNLGKRPLDTYYEIFDRQNIKYSYKENQLDLIISGKL KPDEFRVKGNISSQFITGLLFILPTLESDSKIIITTELESKGYLDLTLSTIKDFGVEIINNNYKEFIIKGNQTYKARDYK VEGDYSQGAFYLSADAIGEDISILDLKEDSLQGDSEVVEILSRMGMEILREGNKIKGITNGLNGTLIDASQCPDIIPVLS VVASLSIGKTTIINAGRLRIKECDRLHAINVELSKLGANIEEKEDSLIIEGVSKLNGGVEVWSHKDHRIAMTLAIASCRC DKPIILKDFECVSKSYPHFFKDFKMLGGRIDEWNMGK >Mature_436_residues GSLKIYPSKLSGDVKIPPSKSMAHRAVICSSLSNGKSRISNIDFSDDIIATIRAMTSLGAIIEKKEDILEISGIFSKEGI LNRENQLNQPKLTIDCNESGSTLRFLVPISLAFDGVKRFIGRGNLGKRPLDTYYEIFDRQNIKYSYKENQLDLIISGKLK PDEFRVKGNISSQFITGLLFILPTLESDSKIIITTELESKGYLDLTLSTIKDFGVEIINNNYKEFIIKGNQTYKARDYKV EGDYSQGAFYLSADAIGEDISILDLKEDSLQGDSEVVEILSRMGMEILREGNKIKGITNGLNGTLIDASQCPDIIPVLSV VASLSIGKTTIINAGRLRIKECDRLHAINVELSKLGANIEEKEDSLIIEGVSKLNGGVEVWSHKDHRIAMTLAIASCRCD KPIILKDFECVSKSYPHFFKDFKMLGGRIDEWNMGK
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=428, Percent_Identity=31.5420560747664, Blast_Score=205, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6320332, Length=477, Percent_Identity=24.1090146750524, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_CLOD6 (Q187E3)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001088340.1 - ProteinModelPortal: Q187E3 - SMR: Q187E3 - STRING: Q187E3 - GeneID: 4914602 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1834 - NMPDR: fig|1496.1.peg.2970 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: SSQFITS - ProtClustDB: PRK02427 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 48582; Mature: 48450
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLKIYPSKLSGDVKIPPSKSMAHRAVICSSLSNGKSRISNIDFSDDIIATIRAMTSLG CCCEEEEHHCCCCCEECCCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHH AIIEKKEDILEISGIFSKEGILNRENQLNQPKLTIDCNESGSTLRFLVPISLAFDGVKRF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHH IGRGNLGKRPLDTYYEIFDRQNIKYSYKENQLDLIISGKLKPDEFRVKGNISSQFITGLL HCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEECCCHHHHHHHHH FILPTLESDSKIIITTELESKGYLDLTLSTIKDFGVEIINNNYKEFIIKGNQTYKARDYK HHHCCCCCCCEEEEEEEECCCCEEEEEHHHHHHCCHHEECCCCEEEEEECCCEEEEEEEE VEGDYSQGAFYLSADAIGEDISILDLKEDSLQGDSEVVEILSRMGMEILREGNKIKGITN ECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC GLNGTLIDASQCPDIIPVLSVVASLSIGKTTIINAGRLRIKECDRLHAINVELSKLGANI CCCCCEEEHHHCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEEEEEEHHHHCCCC EEKEDSLIIEGVSKLNGGVEVWSHKDHRIAMTLAIASCRCDKPIILKDFECVSKSYPHFF CCCCCCEEEEEHHHCCCCEEEECCCCCEEEEEEEEEHHCCCCCEEEECHHHHHCCCHHHH KDFKMLGGRIDEWNMGK HHHHHHCCCCCCCCCCC >Mature Secondary Structure GSLKIYPSKLSGDVKIPPSKSMAHRAVICSSLSNGKSRISNIDFSDDIIATIRAMTSLG CCEEEEHHCCCCCEECCCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHH AIIEKKEDILEISGIFSKEGILNRENQLNQPKLTIDCNESGSTLRFLVPISLAFDGVKRF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHH IGRGNLGKRPLDTYYEIFDRQNIKYSYKENQLDLIISGKLKPDEFRVKGNISSQFITGLL HCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEECCCHHHHHHHHH FILPTLESDSKIIITTELESKGYLDLTLSTIKDFGVEIINNNYKEFIIKGNQTYKARDYK HHHCCCCCCCEEEEEEEECCCCEEEEEHHHHHHCCHHEECCCCEEEEEECCCEEEEEEEE VEGDYSQGAFYLSADAIGEDISILDLKEDSLQGDSEVVEILSRMGMEILREGNKIKGITN ECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC GLNGTLIDASQCPDIIPVLSVVASLSIGKTTIINAGRLRIKECDRLHAINVELSKLGANI CCCCCEEEHHHCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEEEEEEHHHHCCCC EEKEDSLIIEGVSKLNGGVEVWSHKDHRIAMTLAIASCRCDKPIILKDFECVSKSYPHFF CCCCCCEEEEEHHHCCCCEEEECCCCCEEEEEEEEEHHCCCCCEEEECHHHHHCCCHHHH KDFKMLGGRIDEWNMGK HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA