| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is bcp [H]
Identifier: 126699430
GI number: 126699430
Start: 2106636
End: 2107100
Strand: Direct
Name: bcp [H]
Synonym: CD1822
Alternate gene names: 126699430
Gene position: 2106636-2107100 (Clockwise)
Preceding gene: 126699429
Following gene: 126699431
Centisome position: 49.1
GC content: 30.11
Gene sequence:
>465_bases ATGTTGAGTATAGGAACAAAAGCACCAGAATTTACACTAGAAGATAAAGATGGAAATAAGGTAAGTATGTCAGATTTTAA AGGTAAAAAAGTAGTAGTATATTTTTATCCTAAAGATAATACACCAGGATGTACACGTCAAGCTTGTGCTTTTAGAAATG CATATGATGGTTTTAAAAAGGAAGATATACAAGTTATTGGGATAAGTAAAGATAGTATAAAATCACATCAAAAATTTGCA GAAAAGCATGAACTTCCTTTTATTTTACTTTCTGACCCTGACTTAGTTGCTATAAAAGCTTTTGATGTATGGAAAGAGAA AAAAATGTATGGAAAAACTGCATTGGGAGTTGTACGTGCGACATATATTATAGATGAAAATGGAATTATTGAAAAAGTCT TTGAAAAAGCAAAACCAGACACAAATGCACAAGAGATTCTTGAATATTTGGAAAAACAGGAGTAA
Upstream 100 bases:
>100_bases TATACATAAAAAATAAAATATTTTATTTATATATAGATTTATAGGGTAATAATATAAGCATAGTATAAAATTATTAATAA AAACAAAAGGAGAGATATTT
Downstream 100 bases:
>100_bases TAAGAATTTATGATTATAATGTTATCACCAGCTAAAAATATGAAGAATATAGAAGTATTTGATAGAGATTTGAGTTTGCC TTGTTTTATAGATAACACAA
Product: thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLSIGTKAPEFTLEDKDGNKVSMSDFKGKKVVVYFYPKDNTPGCTRQACAFRNAYDGFKKEDIQVIGISKDSIKSHQKFA EKHELPFILLSDPDLVAIKAFDVWKEKKMYGKTALGVVRATYIIDENGIIEKVFEKAKPDTNAQEILEYLEKQE
Sequences:
>Translated_154_residues MLSIGTKAPEFTLEDKDGNKVSMSDFKGKKVVVYFYPKDNTPGCTRQACAFRNAYDGFKKEDIQVIGISKDSIKSHQKFA EKHELPFILLSDPDLVAIKAFDVWKEKKMYGKTALGVVRATYIIDENGIIEKVFEKAKPDTNAQEILEYLEKQE >Mature_154_residues MLSIGTKAPEFTLEDKDGNKVSMSDFKGKKVVVYFYPKDNTPGCTRQACAFRNAYDGFKKEDIQVIGISKDSIKSHQKFA EKHELPFILLSDPDLVAIKAFDVWKEKKMYGKTALGVVRATYIIDENGIIEKVFEKAKPDTNAQEILEYLEKQE
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=152, Percent_Identity=44.7368421052632, Blast_Score=139, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6322180, Length=94, Percent_Identity=45.7446808510638, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17504; Mature: 17504
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIGTKAPEFTLEDKDGNKVSMSDFKGKKVVVYFYPKDNTPGCTRQACAFRNAYDGFKK CCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCC EDIQVIGISKDSIKSHQKFAEKHELPFILLSDPDLVAIKAFDVWKEKKMYGKTALGVVRA CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHHHHHHCHHHHHHEEE TYIIDENGIIEKVFEKAKPDTNAQEILEYLEKQE EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLSIGTKAPEFTLEDKDGNKVSMSDFKGKKVVVYFYPKDNTPGCTRQACAFRNAYDGFKK CCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCC EDIQVIGISKDSIKSHQKFAEKHELPFILLSDPDLVAIKAFDVWKEKKMYGKTALGVVRA CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHHHHHHCHHHHHHEEE TYIIDENGIIEKVFEKAKPDTNAQEILEYLEKQE EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]