| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is add [H]
Identifier: 126699354
GI number: 126699354
Start: 2024021
End: 2025010
Strand: Direct
Name: add [H]
Synonym: CD1747
Alternate gene names: 126699354
Gene position: 2024021-2025010 (Clockwise)
Preceding gene: 126699351
Following gene: 126699355
Centisome position: 47.18
GC content: 26.77
Gene sequence:
>990_bases ATGTTTGAAAATTTACCTAAGATAGATTTACATTGCCACTTAGATGGAAGTGTTAGAGTAGAAACCATGCTTGATATAGC TATTAAAGAGAAAATAGATTTACCTTCAAATAATATGGATGAAATAAAAAAATTAGCAAAGGTTTCTTTTAATTGTACTT CACTAGATGAATATTTAGAAAAATTTGATTTACCCTTAAAAGTAATGCAATCTAAGGAAAATTTAAAAAGAATTACTTTT GAACTTTTGGAAGATGCAAGTAGAGAAAATGTAAAATATATTGAAATTAGATTTGCACCATTACTTCACACCCAAAAAGG TATGAGTGTTAAAAATATAATTGAGGGTATAATTGAAGGAATTAGAGAAGCTGAAAGTATTTATGATATAAAAGGCAATT TAATATTAGGTTGTATGAGAACAATGACCTCAAAAGAGGCATTATTAGTAATTGAAGAAGGGAAATCATTTGTAAATAAA GGTGTTGTAGCAGTAGACTTGTGTGGTCCAGAGAAAGAGGGATTTTGTAAGGAATATAAAGATGTTTTTAAATTAGCAAG AGAATATGGATATAAAGTTACAATACATGCAGGAGAAGCTGCAAGTGGAGAAAATGTATTAGATGCTATAAATATTTTAA AGGCGGATAGGATTGGTCATGGGGTAAAAATTAAAGACCATAAAAAGGCGTATAATTTAGTTAAAGATAAAAAAATATTG CTTGAATTATGTCCAACTAGTAATGTACAAACTAAGACAGTAGATTCTTATGAAGCACATCCATTTTATACTTTTTATAA AGATAATTTACATGTAAGTATAAATACTGATAATAGAACTGTATCAGATATAAATTTAAGTTCAGAACTAAATGTTATAT TTGATACTTTTAAACTAGGATTAGAAGACTATAAAATAATTTATAGAAATGCAGTAGAAGCTAGTTTTGCAGATAAAGAA ACTAAAGAGTATTTGAATAGTTTAATTTAA
Upstream 100 bases:
>100_bases TGACTTTTTTAGAATTAAAAACTGTAGTATATTGATATAATAGAAATAAGACTTAAAAATCTGTTGATAGTATTATTTAT AAGTACAGTAGGAGGATAAA
Downstream 100 bases:
>100_bases TAGATAAAAATATTTAAACTTTAAATTAAGCTATTAAATTGACAAAAATACATTGTATTAGGAGAAAAAATGTGAAAGAT TATGAAGATGTTGTTTATAT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MFENLPKIDLHCHLDGSVRVETMLDIAIKEKIDLPSNNMDEIKKLAKVSFNCTSLDEYLEKFDLPLKVMQSKENLKRITF ELLEDASRENVKYIEIRFAPLLHTQKGMSVKNIIEGIIEGIREAESIYDIKGNLILGCMRTMTSKEALLVIEEGKSFVNK GVVAVDLCGPEKEGFCKEYKDVFKLAREYGYKVTIHAGEAASGENVLDAINILKADRIGHGVKIKDHKKAYNLVKDKKIL LELCPTSNVQTKTVDSYEAHPFYTFYKDNLHVSINTDNRTVSDINLSSELNVIFDTFKLGLEDYKIIYRNAVEASFADKE TKEYLNSLI
Sequences:
>Translated_329_residues MFENLPKIDLHCHLDGSVRVETMLDIAIKEKIDLPSNNMDEIKKLAKVSFNCTSLDEYLEKFDLPLKVMQSKENLKRITF ELLEDASRENVKYIEIRFAPLLHTQKGMSVKNIIEGIIEGIREAESIYDIKGNLILGCMRTMTSKEALLVIEEGKSFVNK GVVAVDLCGPEKEGFCKEYKDVFKLAREYGYKVTIHAGEAASGENVLDAINILKADRIGHGVKIKDHKKAYNLVKDKKIL LELCPTSNVQTKTVDSYEAHPFYTFYKDNLHVSINTDNRTVSDINLSSELNVIFDTFKLGLEDYKIIYRNAVEASFADKE TKEYLNSLI >Mature_329_residues MFENLPKIDLHCHLDGSVRVETMLDIAIKEKIDLPSNNMDEIKKLAKVSFNCTSLDEYLEKFDLPLKVMQSKENLKRITF ELLEDASRENVKYIEIRFAPLLHTQKGMSVKNIIEGIIEGIREAESIYDIKGNLILGCMRTMTSKEALLVIEEGKSFVNK GVVAVDLCGPEKEGFCKEYKDVFKLAREYGYKVTIHAGEAASGENVLDAINILKADRIGHGVKIKDHKKAYNLVKDKKIL LELCPTSNVQTKTVDSYEAHPFYTFYKDNLHVSINTDNRTVSDINLSSELNVIFDTFKLGLEDYKIIYRNAVEASFADKE TKEYLNSLI
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=344, Percent_Identity=28.1976744186047, Blast_Score=148, Evalue=8e-36, Organism=Homo sapiens, GI226693318, Length=334, Percent_Identity=27.5449101796407, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI61175224, Length=226, Percent_Identity=28.3185840707965, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1787910, Length=327, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=2e-49, Organism=Caenorhabditis elegans, GI32565969, Length=333, Percent_Identity=29.7297297297297, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17538512, Length=333, Percent_Identity=29.7297297297297, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115537133, Length=326, Percent_Identity=29.1411042944785, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324188, Length=335, Percent_Identity=24.4776119402985, Blast_Score=117, Evalue=3e-27, Organism=Drosophila melanogaster, GI24645260, Length=327, Percent_Identity=25.9938837920489, Blast_Score=104, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37418; Mature: 37418
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFENLPKIDLHCHLDGSVRVETMLDIAIKEKIDLPSNNMDEIKKLAKVSFNCTSLDEYLE CCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHH KFDLPLKVMQSKENLKRITFELLEDASRENVKYIEIRFAPLLHTQKGMSVKNIIEGIIEG HHCCCHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCCCHHHHHHHHHHH IREAESIYDIKGNLILGCMRTMTSKEALLVIEEGKSFVNKGVVAVDLCGPEKEGFCKEYK HHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEECCCCCCCHHHHHH DVFKLAREYGYKVTIHAGEAASGENVLDAINILKADRIGHGVKIKDHKKAYNLVKDKKIL HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCEEE LELCPTSNVQTKTVDSYEAHPFYTFYKDNLHVSINTDNRTVSDINLSSELNVIFDTFKLG EEECCCCCCCEEECCCCCCCCEEEEEECEEEEEEECCCCEEEEECCCCCHHHHHHHHHHC LEDYKIIYRNAVEASFADKETKEYLNSLI CHHHHHHHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure MFENLPKIDLHCHLDGSVRVETMLDIAIKEKIDLPSNNMDEIKKLAKVSFNCTSLDEYLE CCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHH KFDLPLKVMQSKENLKRITFELLEDASRENVKYIEIRFAPLLHTQKGMSVKNIIEGIIEG HHCCCHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCCCHHHHHHHHHHH IREAESIYDIKGNLILGCMRTMTSKEALLVIEEGKSFVNKGVVAVDLCGPEKEGFCKEYK HHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEECCCCCCCHHHHHH DVFKLAREYGYKVTIHAGEAASGENVLDAINILKADRIGHGVKIKDHKKAYNLVKDKKIL HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCEEE LELCPTSNVQTKTVDSYEAHPFYTFYKDNLHVSINTDNRTVSDINLSSELNVIFDTFKLG EEECCCCCCCEEECCCCCCCCEEEEEECEEEEEEECCCCEEEEECCCCCHHHHHHHHHHC LEDYKIIYRNAVEASFADKETKEYLNSLI CHHHHHHHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA