Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yhcG [H]

Identifier: 126699211

GI number: 126699211

Start: 1860495

End: 1861211

Strand: Direct

Name: yhcG [H]

Synonym: CD1607

Alternate gene names: 126699211

Gene position: 1860495-1861211 (Clockwise)

Preceding gene: 126699210

Following gene: 126699212

Centisome position: 43.37

GC content: 28.45

Gene sequence:

>717_bases
ATGATAGAAATAAAGAATGTCAGCAAAACATATAAAAGGATGCAAGGGCTTAAAATAAGAAAGATAGAAGCTTTAAAAAA
TGTAAGTTTTAATATAGAAAAGGGAAAAATAACTGCATTACTTGGTATAAATGGTGTTGGTAAATCAACTATGTTAAAAG
CAATAGCAGGACTTATAAACATTGATAGTGGAGAAATTCGTATAGATGGAGAAAAAATAAATGAAAAGGTATACAATAAA
TTGGCTTTTGTTCCAGATGTACAATCTCACTTTAGCAATACAACAATAAAAGAAACATTTGAATTTATGGAAATTTTTTA
TTCAAAGTGGAATAAAGAAAAATCAAAAGAAATGATGGACATATTTAAATTGGATGAAGATGAAATAATTGATAACTTGT
CAAAAGGAAACATTGCAAGAGTAAAATTAATACTTGGATTTTGCCAAGACCCAGAGTACATACTTCTTGATGAACCATTT
ACAGGAATTGATTTGTTTAAGAGGGAAGAGTTTATAGGAGTAATAGCGCAATATATGGAGGAAAATCAAGCCATTATTAT
AACTACTCATGAGATAGTAGAGATAGAAAGTTTAGTTGATGAGGTTGTAATTCTTGATGAAGGGCAGATTATAACTTCAT
TTAATGCAGAAGAATTAAGAGAAAGAGAAGGTAAATCTATATTAGATAAGATGAGGGAGGTATATAAGAATGAATAA

Upstream 100 bases:

>100_bases
TTTTAAAAATAATAGAAGATAAGTATTAGTTTTTTAACAAATAGAAAACTTAGTTTAGAAAGTTTATTTATAAGCATATT
GGATGTGGAGGATAGTAAAT

Downstream 100 bases:

>100_bases
ACTTCTATATCTAATAAATGTAGATTTGAGAAGAAGCAATAAGTTTTATATAGCTTATATATCATTTTTTTCATTAATTA
CACTTAGTTTAAATTTATTC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIEIKNVSKTYKRMQGLKIRKIEALKNVSFNIEKGKITALLGINGVGKSTMLKAIAGLINIDSGEIRIDGEKINEKVYNK
LAFVPDVQSHFSNTTIKETFEFMEIFYSKWNKEKSKEMMDIFKLDEDEIIDNLSKGNIARVKLILGFCQDPEYILLDEPF
TGIDLFKREEFIGVIAQYMEENQAIIITTHEIVEIESLVDEVVILDEGQIITSFNAEELREREGKSILDKMREVYKNE

Sequences:

>Translated_238_residues
MIEIKNVSKTYKRMQGLKIRKIEALKNVSFNIEKGKITALLGINGVGKSTMLKAIAGLINIDSGEIRIDGEKINEKVYNK
LAFVPDVQSHFSNTTIKETFEFMEIFYSKWNKEKSKEMMDIFKLDEDEIIDNLSKGNIARVKLILGFCQDPEYILLDEPF
TGIDLFKREEFIGVIAQYMEENQAIIITTHEIVEIESLVDEVVILDEGQIITSFNAEELREREGKSILDKMREVYKNE
>Mature_238_residues
MIEIKNVSKTYKRMQGLKIRKIEALKNVSFNIEKGKITALLGINGVGKSTMLKAIAGLINIDSGEIRIDGEKINEKVYNK
LAFVPDVQSHFSNTTIKETFEFMEIFYSKWNKEKSKEMMDIFKLDEDEIIDNLSKGNIARVKLILGFCQDPEYILLDEPF
TGIDLFKREEFIGVIAQYMEENQAIIITTHEIVEIESLVDEVVILDEGQIITSFNAEELREREGKSILDKMREVYKNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27477115, Length=218, Percent_Identity=28.4403669724771, Blast_Score=94, Evalue=8e-20,
Organism=Homo sapiens, GI27436953, Length=247, Percent_Identity=29.9595141700405, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI27262624, Length=236, Percent_Identity=28.8135593220339, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI27262626, Length=236, Percent_Identity=28.8135593220339, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI153792144, Length=233, Percent_Identity=29.6137339055794, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI45446740, Length=240, Percent_Identity=24.5833333333333, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI47078218, Length=240, Percent_Identity=24.5833333333333, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI11967969, Length=214, Percent_Identity=26.6355140186916, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI116734710, Length=233, Percent_Identity=25.7510729613734, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI6005701, Length=216, Percent_Identity=28.2407407407407, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI105990541, Length=198, Percent_Identity=26.7676767676768, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI31657092, Length=196, Percent_Identity=29.0816326530612, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI21536376, Length=233, Percent_Identity=24.0343347639485, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI11967971, Length=216, Percent_Identity=25, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI30795238, Length=249, Percent_Identity=24.8995983935743, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI27881501, Length=249, Percent_Identity=24.8995983935743, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI89111135, Length=214, Percent_Identity=25.7009345794392, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI9955963, Length=237, Percent_Identity=25.7383966244726, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI150417984, Length=212, Percent_Identity=25, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI9955968, Length=239, Percent_Identity=23.4309623430962, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI9955966, Length=239, Percent_Identity=23.4309623430962, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI45243524, Length=239, Percent_Identity=23.4309623430962, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI48994943, Length=224, Percent_Identity=27.6785714285714, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87081782, Length=230, Percent_Identity=28.2608695652174, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788761, Length=246, Percent_Identity=29.2682926829268, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=30.3030303030303, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788450, Length=232, Percent_Identity=26.7241379310345, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789593, Length=230, Percent_Identity=24.3478260869565, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787547, Length=227, Percent_Identity=26.431718061674, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=27.4336283185841, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787792, Length=216, Percent_Identity=25.9259259259259, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787143, Length=238, Percent_Identity=28.9915966386555, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=29.4685990338164, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786872, Length=225, Percent_Identity=28, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790739, Length=210, Percent_Identity=23.8095238095238, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI48995001, Length=253, Percent_Identity=25.296442687747, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786563, Length=196, Percent_Identity=27.0408163265306, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789672, Length=232, Percent_Identity=24.5689655172414, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=22.3255813953488, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790525, Length=247, Percent_Identity=23.8866396761134, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786803, Length=232, Percent_Identity=22.8448275862069, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=23.5023041474654, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=24.2553191489362, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788165, Length=223, Percent_Identity=26.0089686098655, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=232, Percent_Identity=25.4310344827586, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082268, Length=229, Percent_Identity=27.0742358078603, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787112, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786345, Length=216, Percent_Identity=25, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=24.8847926267281, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788210, Length=222, Percent_Identity=25.2252252252252, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=23.6607142857143, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788225, Length=238, Percent_Identity=25.2100840336134, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789991, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786253, Length=190, Percent_Identity=24.7368421052632, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1789032, Length=210, Percent_Identity=25.2380952380952, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787370, Length=222, Percent_Identity=26.5765765765766, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788472, Length=227, Percent_Identity=24.2290748898678, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=189, Percent_Identity=26.4550264550265, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082267, Length=211, Percent_Identity=24.1706161137441, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=223, Percent_Identity=28.2511210762332, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=29.7674418604651, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=29.7674418604651, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=29.7674418604651, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI115533608, Length=252, Percent_Identity=23.8095238095238, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=212, Percent_Identity=25, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17567243, Length=212, Percent_Identity=29.2452830188679, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17569081, Length=216, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17539902, Length=229, Percent_Identity=24.4541484716157, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17552010, Length=214, Percent_Identity=28.0373831775701, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=236, Percent_Identity=22.8813559322034, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666092, Length=217, Percent_Identity=29.4930875576037, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI221512771, Length=217, Percent_Identity=26.2672811059908, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI116007328, Length=205, Percent_Identity=29.7560975609756, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28574150, Length=205, Percent_Identity=29.7560975609756, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281362751, Length=219, Percent_Identity=26.4840182648402, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24650855, Length=202, Percent_Identity=28.2178217821782, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650853, Length=202, Percent_Identity=28.2178217821782, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24582014, Length=202, Percent_Identity=29.2079207920792, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24582012, Length=202, Percent_Identity=29.2079207920792, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24648314, Length=220, Percent_Identity=27.7272727272727, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24643674, Length=217, Percent_Identity=22.5806451612903, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28573571, Length=196, Percent_Identity=27.0408163265306, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573573, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21357907, Length=250, Percent_Identity=27.2, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85725262, Length=207, Percent_Identity=27.0531400966184, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28574744, Length=209, Percent_Identity=23.9234449760766, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85724864, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580555, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI85816269, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580553, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27412; Mature: 27412

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MIEIKNVSKTYKRMQGLKIRKIEALKNVSFNIEKGKITALLGINGVGKSTMLKAIAGLIN
CEEECHHHHHHHHHHCCCHHHHHHHHCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHC
IDSGEIRIDGEKINEKVYNKLAFVPDVQSHFSNTTIKETFEFMEIFYSKWNKEKSKEMMD
CCCCEEEECHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
IFKLDEDEIIDNLSKGNIARVKLILGFCQDPEYILLDEPFTGIDLFKREEFIGVIAQYME
HHCCCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
ENQAIIITTHEIVEIESLVDEVVILDEGQIITSFNAEELREREGKSILDKMREVYKNE
CCCEEEEEHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEIKNVSKTYKRMQGLKIRKIEALKNVSFNIEKGKITALLGINGVGKSTMLKAIAGLIN
CEEECHHHHHHHHHHCCCHHHHHHHHCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHC
IDSGEIRIDGEKINEKVYNKLAFVPDVQSHFSNTTIKETFEFMEIFYSKWNKEKSKEMMD
CCCCEEEECHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
IFKLDEDEIIDNLSKGNIARVKLILGFCQDPEYILLDEPFTGIDLFKREEFIGVIAQYME
HHCCCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
ENQAIIITTHEIVEIESLVDEVVILDEGQIITSFNAEELREREGKSILDKMREVYKNE
CCCEEEEEHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]