Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is kdpC

Identifier: 126699197

GI number: 126699197

Start: 1848789

End: 1849415

Strand: Direct

Name: kdpC

Synonym: CD1593

Alternate gene names: 126699197

Gene position: 1848789-1849415 (Clockwise)

Preceding gene: 126699196

Following gene: 126699198

Centisome position: 43.09

GC content: 31.9

Gene sequence:

>627_bases
ATGAAAACATTAAAGCCAGCATTACTTGTAAGTATTGTATTGTTAGTTGTTTGTGGACTTGTATATCCACTTGTTTTGAC
AGGTGTAAGTCAAGTTGCATTTAAAGATAAAGCCAATGGAAGTATGATAGAAGTAAATGGTGTAAAAGTAGGTTCAGAAC
TTATTGGTCAAAGCTTTACAGATGCGAGATTCTTTAAGGGAAGAGTATCATCAGTAAACTATAATACTTATACAAAAGAA
GATTTAGTACCAGATAAAGATGGAAATACATCTTATGGAGGTGTATCATCAGGGTCTTTTAATTATGGAGCTACAAATCC
AGAACTTCATGATAGAGTACAAAAAGATATAGAAAAGTTTTTAAAGGATAATCCAACTGTCAAAAGAGAGGATATACCAA
CAGATTTACTTACAGCATCAGGTTCAGGACTTGACCCTAATATAAGTCCAGCCTCTGCAAAAATTCAGATACCAGCTATA
GCAAAAGCGTCTGGAATATCAGAAAGTAAATTACAAAAAATTGTAGATGATAATACTTCCAAAAAACTTTTTGGAGTTTT
AGGTGAAGATAGAGTTAATGTATTAAAAGTTAATGTAGAGGTCGCAAAAATATTAGGTCTTATATAG

Upstream 100 bases:

>100_bases
TGGAGTTATAGTACCATTTTTAGGAATAAAATTAATTGATTTATTGATTACACCTTTAGTAATGGTTCTTAATTTAGGTT
AATAAATGGAGGATATAAAA

Downstream 100 bases:

>100_bases
TATTTTGTGGAATTTTAGCAACAAAATATTACGCAAGATTTAATTTAAAGGTTAAATTTTAAAGAGTGAAAATCGATAAT
GATTTTCACTTTTTTATTTG

Product: potassium-transporting ATPase subunit C

Products: NA

Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYNTYTKE
DLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAI
AKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNVEVAKILGLI

Sequences:

>Translated_208_residues
MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYNTYTKE
DLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAI
AKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNVEVAKILGLI
>Mature_208_residues
MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYNTYTKE
DLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAI
AKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNVEVAKILGLI

Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex

COG id: COG2156

COG function: function code P; K+-transporting ATPase, c chain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdpC family

Homologues:

Organism=Escherichia coli, GI1786913, Length=204, Percent_Identity=34.3137254901961, Blast_Score=117, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATKC_CLOD6 (Q186E8)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001088094.1
- STRING:   Q186E8
- GeneID:   4914786
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD1593
- NMPDR:   fig|1496.1.peg.3325
- eggNOG:   COG2156
- HOGENOM:   HBG724180
- OMA:   GSNNYAP
- ProtClustDB:   PRK13995
- HAMAP:   MF_00276
- InterPro:   IPR003820
- PIRSF:   PIRSF001296
- TIGRFAMs:   TIGR00681

Pfam domain/function: PF02669 KdpC

EC number: =3.6.3.12

Molecular weight: Translated: 22242; Mature: 22242

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x51cfa888)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECHHHHCCCCC
DARFFKGRVSSVNYNTYTKEDLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKF
HHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAIAKASGISESKLQKIVDDNTS
HHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCHHCCCCCCHHHHHHHHCCCCC
KKLFGVLGEDRVNVLKVNVEVAKILGLI
HHHHHHCCCCCEEEEEECHHHHHHHCCH
>Mature Secondary Structure
MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECHHHHCCCCC
DARFFKGRVSSVNYNTYTKEDLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKF
HHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAIAKASGISESKLQKIVDDNTS
HHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCHHCCCCCCHHHHHHHHCCCCC
KKLFGVLGEDRVNVLKVNVEVAKILGLI
HHHHHHCCCCCEEEEEECHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA