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The map label for this gene is yabE [H]

Identifier: 126699178

GI number: 126699178

Start: 1824166

End: 1824963

Strand: Direct

Name: yabE [H]

Synonym: CD1575

Alternate gene names: 126699178

Gene position: 1824166-1824963 (Clockwise)

Preceding gene: 126699176

Following gene: 126699179

Centisome position: 42.52

GC content: 29.57

Gene sequence:

>798_bases
ATGGAGAAAAGAGAAAAGAGGATAATAATATCATCTTTATTAAGTGTATCAATTTTAATGGGTTTGACAAGTATATATTC
TATATTAAATAAAGAAGACATAATTTTAACTGTTAAGGGTCAAGAGCAAAAAGTATCTTCCTTTAAGAAAACAGTTGAGG
AACTTTTGGATGAACAGGGTGTAAAGTATAATTCTGAAGATAAGATTAATCCAAGTTTAGATACAGAACTAAAAGATGAT
ATGAAAATAAAAGTTGTTAAGGTAACTAAAAGTAAAAAAGAAGAGATTGAAAAAATTCCATTTGATACAAAGCATGTAAA
TGATAGTAATTTGTTAAAAGGAAAATCTAAAGTTTATCAAGAAGGTCAAGAAGGAGAAAAAAAACTAGTCTATAATTTAA
CTTACCATGATGGAAAGTTAGTCAAAAAAGTCTTATCAAAAGAAGTAATATCTAAGGAGCCAACTACAAAAATTATAAAA
TATGGAACTAAAGAAAAAGTACTAATAGCATCAAGAGGAGCAAATATAAGAGGAGGCAAACATATGAAAGTGGTTGCCAC
TGCATATGCAGGAGATACAATAACATCTACTGGTACAACTCCAAGATGGGGTGTTATTGCAGTTGACCCACGTGTAATAC
CATATGGAACAAAAGTATATATACCTAAACTGGGTATGACTTTTGTAGCAGAAGATTGTGGAGGTGCAATTAAAGGTAAT
AGAATAGACATTTTTATGAACAGTGAAGGAAAAGCTTCAAATTGGGGAAGGAAAAGTATAGATATATATCTACATTAA

Upstream 100 bases:

>100_bases
GTTACATAAATTTGGAAAGCTATAATATACATATATAATATAAGGTTAAAACTGTAATGAATAATATTAATTTAAAATTT
GAACATGGAAGGAGATTATT

Downstream 100 bases:

>100_bases
ATTAGTGAATAGAATAACTTTACTTGAAGGACAAAAAAGTATAAAATATGAATTAACTAAACTGTTAGATTATTCTTAAA
ACATAAAAATATATCTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MEKREKRIIISSLLSVSILMGLTSIYSILNKEDIILTVKGQEQKVSSFKKTVEELLDEQGVKYNSEDKINPSLDTELKDD
MKIKVVKVTKSKKEEIEKIPFDTKHVNDSNLLKGKSKVYQEGQEGEKKLVYNLTYHDGKLVKKVLSKEVISKEPTTKIIK
YGTKEKVLIASRGANIRGGKHMKVVATAYAGDTITSTGTTPRWGVIAVDPRVIPYGTKVYIPKLGMTFVAEDCGGAIKGN
RIDIFMNSEGKASNWGRKSIDIYLH

Sequences:

>Translated_265_residues
MEKREKRIIISSLLSVSILMGLTSIYSILNKEDIILTVKGQEQKVSSFKKTVEELLDEQGVKYNSEDKINPSLDTELKDD
MKIKVVKVTKSKKEEIEKIPFDTKHVNDSNLLKGKSKVYQEGQEGEKKLVYNLTYHDGKLVKKVLSKEVISKEPTTKIIK
YGTKEKVLIASRGANIRGGKHMKVVATAYAGDTITSTGTTPRWGVIAVDPRVIPYGTKVYIPKLGMTFVAEDCGGAIKGN
RIDIFMNSEGKASNWGRKSIDIYLH
>Mature_265_residues
MEKREKRIIISSLLSVSILMGLTSIYSILNKEDIILTVKGQEQKVSSFKKTVEELLDEQGVKYNSEDKINPSLDTELKDD
MKIKVVKVTKSKKEEIEKIPFDTKHVNDSNLLKGKSKVYQEGQEGEKKLVYNLTYHDGKLVKKVLSKEVISKEPTTKIIK
YGTKEKVLIASRGANIRGGKHMKVVATAYAGDTITSTGTTPRWGVIAVDPRVIPYGTKVYIPKLGMTFVAEDCGGAIKGN
RIDIFMNSEGKASNWGRKSIDIYLH

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 29626; Mature: 29626

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKREKRIIISSLLSVSILMGLTSIYSILNKEDIILTVKGQEQKVSSFKKTVEELLDEQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
VKYNSEDKINPSLDTELKDDMKIKVVKVTKSKKEEIEKIPFDTKHVNDSNLLKGKSKVYQ
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHCCHHHHHH
EGQEGEKKLVYNLTYHDGKLVKKVLSKEVISKEPTTKIIKYGTKEKVLIASRGANIRGGK
CCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCC
HMKVVATAYAGDTITSTGTTPRWGVIAVDPRVIPYGTKVYIPKLGMTFVAEDCGGAIKGN
EEEEEEEEECCCCEECCCCCCCCEEEEECCEEECCCCEEEEECCCCEEEEHHCCCCCCCC
RIDIFMNSEGKASNWGRKSIDIYLH
EEEEEECCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MEKREKRIIISSLLSVSILMGLTSIYSILNKEDIILTVKGQEQKVSSFKKTVEELLDEQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
VKYNSEDKINPSLDTELKDDMKIKVVKVTKSKKEEIEKIPFDTKHVNDSNLLKGKSKVYQ
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHCCHHHHHH
EGQEGEKKLVYNLTYHDGKLVKKVLSKEVISKEPTTKIIKYGTKEKVLIASRGANIRGGK
CCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCC
HMKVVATAYAGDTITSTGTTPRWGVIAVDPRVIPYGTKVYIPKLGMTFVAEDCGGAIKGN
EEEEEEEEECCCCEECCCCCCCCEEEEECCEEECCCCEEEEECCCCEEEEHHCCCCCCCC
RIDIFMNSEGKASNWGRKSIDIYLH
EEEEEECCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]