Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699146

Identifier: 126699146

GI number: 126699146

Start: 1790950

End: 1791990

Strand: Direct

Name: 126699146

Synonym: CD1542

Alternate gene names: NA

Gene position: 1790950-1791990 (Clockwise)

Preceding gene: 126699145

Following gene: 126699147

Centisome position: 41.74

GC content: 27.19

Gene sequence:

>1041_bases
ATGGAATTTACAAAGAAAAGCAAATTAAAAAATATGTATGTAAACATGAATGTAGCTAGAATGTTGTCTAAGATAAATGA
GTATAAGGGTAGACAACTGCTTTACAAAAAACAACCAAAAGAAATTTTAGAAAACTTAGAAAAAAAATCTTTAGTAGATT
GTTCTGAATCTACATACATTGGAAATCAAAGAGATAGTAGTAATTTTAATCTAGAAAAGTTGATAAGTAATGAAGTTACA
CCTAGAAGTAGAGAGGAATTGAGTATTGTTGAATACAGAGATGTGGTAAAAACTATTAACAGTGCTTATGAGAGTATTCC
CATCAGTTCACAAACGATTCTTGAGCTTCATGGATACTTATATAAATTTTCATCTACTAGAGGAGGAAGTTATAAGTCAG
ATAATGATTTTATTGAACACAATTTAAAACCTAGCGAATTTATAAGTACTGATTCAAGTGTCAATAAAGTTGAAAAAGCT
GTAGAAGAAATATGTGAAGCTTATAATACATTGATAGAGGAAGATGAAATTGATATATTAATATTAATTTCTGCATTTGT
GTTAGATTTCATATTGATACATCCATTCAAAGAAGGTAATATAAAAATGGCGAGAGTACTTATCCTATTGTTACTAAATA
AAAATGGGTATGAAGTTGGAAGATATATAAGTTTAGGAAAGATATTTGATGATAGTTCATATGAATATTATAGTAATTTA
AATTATTTGAAAGCCTCAATAGGTAGTGAAAAAGCAGATATGAATGCATGGATTGAGTATTTTTTAGAGACGATATTAAC
TGCATATGAGAAGCTGGATGATAGTTTAAATATATCTGATAAGAAAAGACAAACAAAAACTAGTAGAATAGAGAAAATAA
TAAATTCTACCCTTGGATATTTTACAAAAGAAGATATAAGAGATTTATGTCCTGACATTCCAGAACCTACTATAAATAGA
GTTTTTAATAATCTAAGAAAACAAGATAAGATAGAAGTTGTTGCAAGAGGAAGAAGTGCAAAATGGAAGAAAAAATATTA
A

Upstream 100 bases:

>100_bases
AAATTCAGATAATTGAGCAAGAAATTGCAAAAAATACGATTATATGATAAAATAAAACCGCTGTCAAGGATAAGAGAAAT
TCTAATTATGGAGTGATTTT

Downstream 100 bases:

>100_bases
AAAATGTTTAGATAACTAAAATGGTATAGTGTTTTACACTATACCATTTTTAATGTCATTAGCATGAGCAATAATTTAAC
AACTTAAGCAATATCAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Filamentation Induced By CAMP Protein Fic; Fic Protein Family; Regulation Factor CAMP; AsnC Family Regulatory Protein

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MEFTKKSKLKNMYVNMNVARMLSKINEYKGRQLLYKKQPKEILENLEKKSLVDCSESTYIGNQRDSSNFNLEKLISNEVT
PRSREELSIVEYRDVVKTINSAYESIPISSQTILELHGYLYKFSSTRGGSYKSDNDFIEHNLKPSEFISTDSSVNKVEKA
VEEICEAYNTLIEEDEIDILILISAFVLDFILIHPFKEGNIKMARVLILLLLNKNGYEVGRYISLGKIFDDSSYEYYSNL
NYLKASIGSEKADMNAWIEYFLETILTAYEKLDDSLNISDKKRQTKTSRIEKIINSTLGYFTKEDIRDLCPDIPEPTINR
VFNNLRKQDKIEVVARGRSAKWKKKY

Sequences:

>Translated_346_residues
MEFTKKSKLKNMYVNMNVARMLSKINEYKGRQLLYKKQPKEILENLEKKSLVDCSESTYIGNQRDSSNFNLEKLISNEVT
PRSREELSIVEYRDVVKTINSAYESIPISSQTILELHGYLYKFSSTRGGSYKSDNDFIEHNLKPSEFISTDSSVNKVEKA
VEEICEAYNTLIEEDEIDILILISAFVLDFILIHPFKEGNIKMARVLILLLLNKNGYEVGRYISLGKIFDDSSYEYYSNL
NYLKASIGSEKADMNAWIEYFLETILTAYEKLDDSLNISDKKRQTKTSRIEKIINSTLGYFTKEDIRDLCPDIPEPTINR
VFNNLRKQDKIEVVARGRSAKWKKKY
>Mature_346_residues
MEFTKKSKLKNMYVNMNVARMLSKINEYKGRQLLYKKQPKEILENLEKKSLVDCSESTYIGNQRDSSNFNLEKLISNEVT
PRSREELSIVEYRDVVKTINSAYESIPISSQTILELHGYLYKFSSTRGGSYKSDNDFIEHNLKPSEFISTDSSVNKVEKA
VEEICEAYNTLIEEDEIDILILISAFVLDFILIHPFKEGNIKMARVLILLLLNKNGYEVGRYISLGKIFDDSSYEYYSNL
NYLKASIGSEKADMNAWIEYFLETILTAYEKLDDSLNISDKKRQTKTSRIEKIINSTLGYFTKEDIRDLCPDIPEPTINR
VFNNLRKQDKIEVVARGRSAKWKKKY

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40183; Mature: 40183

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFTKKSKLKNMYVNMNVARMLSKINEYKGRQLLYKKQPKEILENLEKKSLVDCSESTYI
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
GNQRDSSNFNLEKLISNEVTPRSREELSIVEYRDVVKTINSAYESIPISSQTILELHGYL
CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YKFSSTRGGSYKSDNDFIEHNLKPSEFISTDSSVNKVEKAVEEICEAYNTLIEEDEIDIL
HHCCCCCCCCCCCCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ILISAFVLDFILIHPFKEGNIKMARVLILLLLNKNGYEVGRYISLGKIFDDSSYEYYSNL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCCHHHHHHH
NYLKASIGSEKADMNAWIEYFLETILTAYEKLDDSLNISDKKRQTKTSRIEKIINSTLGY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FTKEDIRDLCPDIPEPTINRVFNNLRKQDKIEVVARGRSAKWKKKY
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEFTKKSKLKNMYVNMNVARMLSKINEYKGRQLLYKKQPKEILENLEKKSLVDCSESTYI
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
GNQRDSSNFNLEKLISNEVTPRSREELSIVEYRDVVKTINSAYESIPISSQTILELHGYL
CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YKFSSTRGGSYKSDNDFIEHNLKPSEFISTDSSVNKVEKAVEEICEAYNTLIEEDEIDIL
HHCCCCCCCCCCCCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ILISAFVLDFILIHPFKEGNIKMARVLILLLLNKNGYEVGRYISLGKIFDDSSYEYYSNL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCCHHHHHHH
NYLKASIGSEKADMNAWIEYFLETILTAYEKLDDSLNISDKKRQTKTSRIEKIINSTLGY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FTKEDIRDLCPDIPEPTINRVFNNLRKQDKIEVVARGRSAKWKKKY
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA