The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is metI [H]

Identifier: 126699094

GI number: 126699094

Start: 1725309

End: 1725965

Strand: Direct

Name: metI [H]

Synonym: CD1490

Alternate gene names: 126699094

Gene position: 1725309-1725965 (Clockwise)

Preceding gene: 126699093

Following gene: 126699095

Centisome position: 40.21

GC content: 30.44

Gene sequence:

>657_bases
ATGAATAGTTTAATTGACTTTTTAACAACACTATTTCCAAATGCATTGTTACAAACTTTGTATATGGTTATAGTACCAAC
TATAGTGGCAACAATATTAGGATTTATATTAGCAATCATATTAGTAGTTACAAAACCAGATGGATTAAAACCAAATAGCA
CAATAAATAGTGCATTAGGATTTATAGTAAATATATTTAGAAGTTTCCCATTTATGATACTTATAGTTGCAATGATTCCA
ATAACTAGATTAATCGTTGGAACAAGTATAGGGGAAACTGCTGCAATAGTGCCAATAACTATTGGGGCAGCACCGTTTAT
CGCTAGAATTATAGAAAGCTCATTAAATGAAGTTGATAAAGGATTGATAGAAGCAGCAAAATCTTTTGGAGCTACAAAAA
GACAAATAGTATTTAAAGTTATGATAAAGGAAGCTATGCCTTCAATAGTATCTGGAATTACATTATCAATAATATCTATA
CTTGGTTATACAGCTATGGCAGGTGCAGTAGGAGCTGGAGGATTAGGTAATATAGCACTTATTTATGGATATCAAAGATT
TGATACAGCAGTAATGGTATATACTGTAATAGCACTTATAATATTAGTTCAGATAATCCAGGGAGTAGGAAATCTGGCTT
ATAAGAAACTAAAATAA

Upstream 100 bases:

>100_bases
GATATTTTAGGTTCACTTATTATAAACATTTCAGATAAAAGTGGAGAGCAAGTAAAACAATATCTAACTAGTAAAGGCAT
AAGATGGGAGGAAATGATAA

Downstream 100 bases:

>100_bases
ATTAATTATAAACATTTTAAAGAGGGGGAGTAAAAATGAAATTAAAGAAATTATTATCAGTAGCATTGGTGTCAGCAATA
GCAATATCAGCAGTAGGTTG

Product: D-methionine ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNSLIDFLTTLFPNALLQTLYMVIVPTIVATILGFILAIILVVTKPDGLKPNSTINSALGFIVNIFRSFPFMILIVAMIP
ITRLIVGTSIGETAAIVPITIGAAPFIARIIESSLNEVDKGLIEAAKSFGATKRQIVFKVMIKEAMPSIVSGITLSIISI
LGYTAMAGAVGAGGLGNIALIYGYQRFDTAVMVYTVIALIILVQIIQGVGNLAYKKLK

Sequences:

>Translated_218_residues
MNSLIDFLTTLFPNALLQTLYMVIVPTIVATILGFILAIILVVTKPDGLKPNSTINSALGFIVNIFRSFPFMILIVAMIP
ITRLIVGTSIGETAAIVPITIGAAPFIARIIESSLNEVDKGLIEAAKSFGATKRQIVFKVMIKEAMPSIVSGITLSIISI
LGYTAMAGAVGAGGLGNIALIYGYQRFDTAVMVYTVIALIILVQIIQGVGNLAYKKLK
>Mature_218_residues
MNSLIDFLTTLFPNALLQTLYMVIVPTIVATILGFILAIILVVTKPDGLKPNSTINSALGFIVNIFRSFPFMILIVAMIP
ITRLIVGTSIGETAAIVPITIGAAPFIARIIESSLNEVDKGLIEAAKSFGATKRQIVFKVMIKEAMPSIVSGITLSIISI
LGYTAMAGAVGAGGLGNIALIYGYQRFDTAVMVYTVIALIILVQIIQGVGNLAYKKLK

Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG2011

COG function: function code P; ABC-type metal ion transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786397, Length=179, Percent_Identity=49.7206703910614, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1789033, Length=145, Percent_Identity=35.1724137931034, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23189; Mature: 23189

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLIDFLTTLFPNALLQTLYMVIVPTIVATILGFILAIILVVTKPDGLKPNSTINSALG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
FIVNIFRSFPFMILIVAMIPITRLIVGTSIGETAAIVPITIGAAPFIARIIESSLNEVDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHH
GLIEAAKSFGATKRQIVFKVMIKEAMPSIVSGITLSIISILGYTAMAGAVGAGGLGNIAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
IYGYQRFDTAVMVYTVIALIILVQIIQGVGNLAYKKLK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSLIDFLTTLFPNALLQTLYMVIVPTIVATILGFILAIILVVTKPDGLKPNSTINSALG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
FIVNIFRSFPFMILIVAMIPITRLIVGTSIGETAAIVPITIGAAPFIARIIESSLNEVDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHH
GLIEAAKSFGATKRQIVFKVMIKEAMPSIVSGITLSIISILGYTAMAGAVGAGGLGNIAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
IYGYQRFDTAVMVYTVIALIILVQIIQGVGNLAYKKLK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]