The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is nuoI [C]

Identifier: 126699072

GI number: 126699072

Start: 1697852

End: 1699126

Strand: Direct

Name: nuoI [C]

Synonym: CD1468

Alternate gene names: 126699072

Gene position: 1697852-1699126 (Clockwise)

Preceding gene: 126699071

Following gene: 126699074

Centisome position: 39.57

GC content: 31.69

Gene sequence:

>1275_bases
GTGATTACTATTTCTCATATAACTGCGAAGAATATGTATAAAAGTTTAGAGGAAAGAATAAACAAGTTTCCACAAGGTGC
TCCACCATCTGATACATTATACAAAATACTAAATGTACTATATACAGAACAAGAGGCGAAGTTAGTTGCTCAGCTTCCAA
TAAAGCCTTTCAGAGTAAAAACAGCAGCTAAAATTTGGAGTGTAAGTGAAAGTGAAGCATATAGAGTATTGGATAAACTT
GCTAGTAAGGCTCTGATACTAGATATAGAAGATAATAAAGGGAAGAAATATATAATGCCTCCTCCAATGGCTGGTTTTTT
TGAGTTTGCCATGATGAGAACGAGACACGATATAGACCAAAAACTTTTGGCAGAGCTTTACTATCAATATATGAATGTAG
AAGAAGATTTTATCAAAGATTTATTTTATTCAACAGAAACGAAGCTTGGAAGAGTATACGTTCAAGAGGAAGTTTTAACT
AATGATAATGAGGTTAGTATTTTAGATTATGAAAGGGCTACTCATATAATTGATGAATCAACTCATATAGGTATAAGTAT
GTGTTACTGTAGACATAGAATGCAACATGTTGGAAAAGCTTGTGATGCTCCTATGGATATATGTATGACGTTTGACAATG
TAGCAAATTCTTTAATAAATAATAAATTTGCAAGACGTGTGGATAAAATAGAATGTAAAGAACTACTTCATCAAGCATAT
GAACATAACTTAGTTCAATGTGGAGAAAATGTTAGGAAAGGGGTTACGTTTATATGTAATTGCTGTGGATGTTGCTGTGA
AGCAATGGTAGCAGCTAAAAGATTTGGAAATCTTCATCCAGTACAGACAACAAGTTTTATACCAAATATAAACCATGAAA
ATTGTGTAAAGTGTGGTAAATGTATAACTGCATGTCCAATAGATGCGATAAGCAAGGTTAAGGAAGATGGTAAAGAATAT
ATAAAAATTGATGAGGATAGATGTTTAGGTTGTGGAGTTTGTGTTAGAAATTGCCATAAAAATAGCATTATGTTATTAAA
GAGAGATGAAAAAATAATAACTCCAGCAAATTCAGTACATAGAGCAGTTCTTATGGCAATTGAAAAAGGGCAGTTACAAA
ATTTAATTTTTGATAATAATGCTCTGGCTAGTCATAGAGCTATGGGAGCTATACTGTCAGCTATATTAAAGCTTGAACCA
GCTAAAAAGATTTTAGCCAGTAAACAATTAAAGTCAGTATATTTAGATAAATTGTTAAGTATGAATGATAAATAG

Upstream 100 bases:

>100_bases
AGGTATTTAACTATTTAGAAAGAATTGGTATTATATAAAGTAAGAGAATATATAATAAGAAAGAATATTTGATTTTATTG
GAAAACAAAAGAAAAAGAAG

Downstream 100 bases:

>100_bases
AAACTAACTTAAAAAAGGCAAAGTTTTAGACTTATCTATATCTTAATAAACTTATCATTTAATATTTAAATTTAATTTTT
ACACATATAAAACTTATAAC

Product: iron-sulfur protein

Products: NAD+; ubiquinol [C]

Alternate protein names: Pyridine Nucleotide-Disulphide Oxidoreductase; Ferredoxin; Glutamate Synthase; 4Fe-4S Ferredoxin; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MITISHITAKNMYKSLEERINKFPQGAPPSDTLYKILNVLYTEQEAKLVAQLPIKPFRVKTAAKIWSVSESEAYRVLDKL
ASKALILDIEDNKGKKYIMPPPMAGFFEFAMMRTRHDIDQKLLAELYYQYMNVEEDFIKDLFYSTETKLGRVYVQEEVLT
NDNEVSILDYERATHIIDESTHIGISMCYCRHRMQHVGKACDAPMDICMTFDNVANSLINNKFARRVDKIECKELLHQAY
EHNLVQCGENVRKGVTFICNCCGCCCEAMVAAKRFGNLHPVQTTSFIPNINHENCVKCGKCITACPIDAISKVKEDGKEY
IKIDEDRCLGCGVCVRNCHKNSIMLLKRDEKIITPANSVHRAVLMAIEKGQLQNLIFDNNALASHRAMGAILSAILKLEP
AKKILASKQLKSVYLDKLLSMNDK

Sequences:

>Translated_424_residues
MITISHITAKNMYKSLEERINKFPQGAPPSDTLYKILNVLYTEQEAKLVAQLPIKPFRVKTAAKIWSVSESEAYRVLDKL
ASKALILDIEDNKGKKYIMPPPMAGFFEFAMMRTRHDIDQKLLAELYYQYMNVEEDFIKDLFYSTETKLGRVYVQEEVLT
NDNEVSILDYERATHIIDESTHIGISMCYCRHRMQHVGKACDAPMDICMTFDNVANSLINNKFARRVDKIECKELLHQAY
EHNLVQCGENVRKGVTFICNCCGCCCEAMVAAKRFGNLHPVQTTSFIPNINHENCVKCGKCITACPIDAISKVKEDGKEY
IKIDEDRCLGCGVCVRNCHKNSIMLLKRDEKIITPANSVHRAVLMAIEKGQLQNLIFDNNALASHRAMGAILSAILKLEP
AKKILASKQLKSVYLDKLLSMNDK
>Mature_424_residues
MITISHITAKNMYKSLEERINKFPQGAPPSDTLYKILNVLYTEQEAKLVAQLPIKPFRVKTAAKIWSVSESEAYRVLDKL
ASKALILDIEDNKGKKYIMPPPMAGFFEFAMMRTRHDIDQKLLAELYYQYMNVEEDFIKDLFYSTETKLGRVYVQEEVLT
NDNEVSILDYERATHIIDESTHIGISMCYCRHRMQHVGKACDAPMDICMTFDNVANSLINNKFARRVDKIECKELLHQAY
EHNLVQCGENVRKGVTFICNCCGCCCEAMVAAKRFGNLHPVQTTSFIPNINHENCVKCGKCITACPIDAISKVKEDGKEY
IKIDEDRCLGCGVCVRNCHKNSIMLLKRDEKIITPANSVHRAVLMAIEKGQLQNLIFDNNALASHRAMGAILSAILKLEP
AKKILASKQLKSVYLDKLLSMNDK

Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.5 [C]

Molecular weight: Translated: 48135; Mature: 48135

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITISHITAKNMYKSLEERINKFPQGAPPSDTLYKILNVLYTEQEAKLVAQLPIKPFRVK
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
TAAKIWSVSESEAYRVLDKLASKALILDIEDNKGKKYIMPPPMAGFFEFAMMRTRHDIDQ
HHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHH
KLLAELYYQYMNVEEDFIKDLFYSTETKLGRVYVQEEVLTNDNEVSILDYERATHIIDES
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCEEEEEHHHHHHHHCCC
THIGISMCYCRHRMQHVGKACDAPMDICMTFDNVANSLINNKFARRVDKIECKELLHQAY
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHNLVQCGENVRKGVTFICNCCGCCCEAMVAAKRFGNLHPVQTTSFIPNINHENCVKCGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHCC
CITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNCHKNSIMLLKRDEKIITPANSVH
HHHHCCHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHCCCCCEEEEECCCCEECCCHHHH
RAVLMAIEKGQLQNLIFDNNALASHRAMGAILSAILKLEPAKKILASKQLKSVYLDKLLS
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
MNDK
CCCC
>Mature Secondary Structure
MITISHITAKNMYKSLEERINKFPQGAPPSDTLYKILNVLYTEQEAKLVAQLPIKPFRVK
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
TAAKIWSVSESEAYRVLDKLASKALILDIEDNKGKKYIMPPPMAGFFEFAMMRTRHDIDQ
HHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHH
KLLAELYYQYMNVEEDFIKDLFYSTETKLGRVYVQEEVLTNDNEVSILDYERATHIIDES
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCEEEEEHHHHHHHHCCC
THIGISMCYCRHRMQHVGKACDAPMDICMTFDNVANSLINNKFARRVDKIECKELLHQAY
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHNLVQCGENVRKGVTFICNCCGCCCEAMVAAKRFGNLHPVQTTSFIPNINHENCVKCGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHCC
CITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNCHKNSIMLLKRDEKIITPANSVH
HHHHCCHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHCCCCCEEEEECCCCEECCCHHHH
RAVLMAIEKGQLQNLIFDNNALASHRAMGAILSAILKLEPAKKILASKQLKSVYLDKLLS
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
MNDK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Iron [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; ubiquinone [C]

Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA