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The map label for this gene is pabC [H]

Identifier: 126699051

GI number: 126699051

Start: 1678071

End: 1678814

Strand: Direct

Name: pabC [H]

Synonym: CD1447

Alternate gene names: 126699051

Gene position: 1678071-1678814 (Clockwise)

Preceding gene: 126699050

Following gene: 126699052

Centisome position: 39.11

GC content: 24.46

Gene sequence:

>744_bases
ATGAAGAATAATGTAGGTTTTGATAGTAGTTTAAGTAAATTTGGAATTGGTTTGTTTGAAACTATTAGAGTTAAAAATGG
AATAGCAGTAGATTTAGATATCCATATAGAAAGAATGCTAAGCTCAATAAATTGTTTGGATTTAGATATAAACTATAAAA
AAGATTTCTTGATAAATGAAATTGTTACATATATAAAAAAAGAAAATGTCATTAATAAAGCACTTAGAATTACTGTTTTT
GATGAAGGTTATAATATATCTATTAGGGATATTCCATATAATCAAGAGACGTATGAGAAGGGGTTTAAATTAGCTATATC
TCCAATAGTTAGGGGGAATAGTTTAATTCATAGACATAAGACTACTAATTATTTTGAAAACATATATACCAAAAATATCG
CAAATAAGACTGGTTATAATGATGGTATATTTTTAAATTCAGAAGGTGTAATATTAGAATGTTCTATGAGCAATATTTTC
TTTATAAAAGGAGAAAGAGTGTACACTCCTAGTGATAGATTACCGATATTAAATGGAATAATAAAAAAAAGGATTATAGA
GATTTGTGACGAATTACATATAGAGTTGATAGAAAATGAAATTAATATATCAGAAATTAGTAGTTTTGATTTTGTTTTTG
TCACAAATAGTCTTATGGGCGCTATAAAGGTTACAGAAATTGACAAAATAAAATTTAATAAAGAAAATGTTGTTTTTGAT
AAAATAGTGAAGTTATTAGAATAA

Upstream 100 bases:

>100_bases
CAAGTTGGAGGAGGAATGACTTGGGATTCTGACCCAGATGAAGAATATCAAGAAACACTTGATAAAGCTAAATCCATAAT
GAAGGCTTTGAGGGGATATT

Downstream 100 bases:

>100_bases
ATTAAAATATTAACAATTTGTTGGAGACAAAAGATGATAGGTTGTATTTATGAAGTATACAATGAAGAGATAACTAAAAT
AATAGAAAACCAAAACACTT

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: BCAT [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKNNVGFDSSLSKFGIGLFETIRVKNGIAVDLDIHIERMLSSINCLDLDINYKKDFLINEIVTYIKKENVINKALRITVF
DEGYNISIRDIPYNQETYEKGFKLAISPIVRGNSLIHRHKTTNYFENIYTKNIANKTGYNDGIFLNSEGVILECSMSNIF
FIKGERVYTPSDRLPILNGIIKKRIIEICDELHIELIENEINISEISSFDFVFVTNSLMGAIKVTEIDKIKFNKENVVFD
KIVKLLE

Sequences:

>Translated_247_residues
MKNNVGFDSSLSKFGIGLFETIRVKNGIAVDLDIHIERMLSSINCLDLDINYKKDFLINEIVTYIKKENVINKALRITVF
DEGYNISIRDIPYNQETYEKGFKLAISPIVRGNSLIHRHKTTNYFENIYTKNIANKTGYNDGIFLNSEGVILECSMSNIF
FIKGERVYTPSDRLPILNGIIKKRIIEICDELHIELIENEINISEISSFDFVFVTNSLMGAIKVTEIDKIKFNKENVVFD
KIVKLLE
>Mature_247_residues
MKNNVGFDSSLSKFGIGLFETIRVKNGIAVDLDIHIERMLSSINCLDLDINYKKDFLINEIVTYIKKENVINKALRITVF
DEGYNISIRDIPYNQETYEKGFKLAISPIVRGNSLIHRHKTTNYFENIYTKNIANKTGYNDGIFLNSEGVILECSMSNIF
FIKGERVYTPSDRLPILNGIIKKRIIEICDELHIELIENEINISEISSFDFVFVTNSLMGAIKVTEIDKIKFNKENVVFD
KIVKLLE

Specific function: Acts on leucine, isoleucine and valine [H]

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787338, Length=252, Percent_Identity=24.6031746031746, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001544
- InterPro:   IPR018300 [H]

Pfam domain/function: PF01063 Aminotran_4 [H]

EC number: =2.6.1.42 [H]

Molecular weight: Translated: 28404; Mature: 28404

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00770 AA_TRANSFER_CLASS_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNVGFDSSLSKFGIGLFETIRVKNGIAVDLDIHIERMLSSINCLDLDINYKKDFLINE
CCCCCCCCCCHHHHCCCHHEEEEECCCEEEEEEHHHHHHHCCCCEEEEECCCCHHHHHHH
IVTYIKKENVINKALRITVFDEGYNISIRDIPYNQETYEKGFKLAISPIVRGNSLIHRHK
HHHHHHHHHHHCEEEEEEEEECCCEEEEEECCCCHHHHHCCCEEEEEEEECCCCEEEECC
TTNYFENIYTKNIANKTGYNDGIFLNSEGVILECSMSNIFFIKGERVYTPSDRLPILNGI
CHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCHHHHHH
IKKRIIEICDELHIELIENEINISEISSFDFVFVTNSLMGAIKVTEIDKIKFNKENVVFD
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECHHHCEEEEEEEEEEEECCCCHHHH
KIVKLLE
HHHHHHC
>Mature Secondary Structure
MKNNVGFDSSLSKFGIGLFETIRVKNGIAVDLDIHIERMLSSINCLDLDINYKKDFLINE
CCCCCCCCCCHHHHCCCHHEEEEECCCEEEEEEHHHHHHHCCCCEEEEECCCCHHHHHHH
IVTYIKKENVINKALRITVFDEGYNISIRDIPYNQETYEKGFKLAISPIVRGNSLIHRHK
HHHHHHHHHHHCEEEEEEEEECCCEEEEEECCCCHHHHHCCCEEEEEEEECCCCEEEECC
TTNYFENIYTKNIANKTGYNDGIFLNSEGVILECSMSNIFFIKGERVYTPSDRLPILNGI
CHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCHHHHHH
IKKRIIEICDELHIELIENEINISEISSFDFVFVTNSLMGAIKVTEIDKIKFNKENVVFD
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECHHHCEEEEEEEEEEEECCCCHHHH
KIVKLLE
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]