| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699033
Identifier: 126699033
GI number: 126699033
Start: 1656627
End: 1657412
Strand: Direct
Name: 126699033
Synonym: CD1429
Alternate gene names: NA
Gene position: 1656627-1657412 (Clockwise)
Preceding gene: 126699032
Following gene: 126699035
Centisome position: 38.61
GC content: 24.81
Gene sequence:
>786_bases TTGATTGTAAAAATAGATAATACTTTAGAAAAAGAATTTTGGCAATATGTATCACATGAAGAAAGTTTAAATTTATTCAT AATTGGATACGTTGAGAATTATGGATTTAGCTCTCAATATCAAGATATATGGTCTCAGGTAGAAGATGGAAATATAACCT CTATAATATTAAAAAATAAGTCAACACTTATAATTTATAGTTTTAAAAATAATTTTAATATAGGAGAAATGAAGAATCAT ATAAAAGATTTAGATGTAGAAAGCATAAGTGGAAAAAAATGTGTAATAGATAGACTAATAAGTAAATACAAAGATTTTTA TGAAAAACTAGATAATAAATTTTGTGTATTAAAAGAAATAAAAGAAATAGATTTTTCCAACATGAAGGAGTATAAAATAG AAAATGCTCAGGAAAAAGATATTGATGAAATAGGAAAACTTTTAAATAGGTCAGACTATAAAGTAAGTAAAAATTACATA GAAGAAAGAAAAGTTCATTTAAAAGAGGGAAATGTAAGAGCATATTTTATTAGAAATGATGATACTATGATTAGCACTGT GTCAACTGGTATGGAAACTAGTTTTTTGGCAATGGTGGTCTCTGTAAGTACAGATAAAAGATATAGGGGAAAAGGACTTG CAAGTTATATGGTTTACAATTTGAGTAAAGAATTGTTGTTAGAAGGAAAAGTTCCATGTCTTTTTTATAATAATGATGTA GCAGGTAAAATATATCATAATATAGGATACAAAGAGATAAATGAATGGACAATTCTTTTTAAATAG
Upstream 100 bases:
>100_bases GATATTTAAAAATTTAGAATATTTGGTAGAATATAATGATTTTAAATGATACTATAAATTATAAGGTATATCATTATTAA CATAGAAGGAGGATATCTGC
Downstream 100 bases:
>100_bases CTATAAAAAATAAAAAACTCTATCGAGAATTAAAGTATTTATAAATAACTATATTTTTACTATAATTCATGATAGAGTTT TTTTAAATTTATGATACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; Gcn5-Related N-Acetyltransferase; Acetyltransferase-Like Protein
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNKSTLIIYSFKNNFNIGEMKNH IKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEIKEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYI EERKVHLKEGNVRAYFIRNDDTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDV AGKIYHNIGYKEINEWTILFK
Sequences:
>Translated_261_residues MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNKSTLIIYSFKNNFNIGEMKNH IKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEIKEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYI EERKVHLKEGNVRAYFIRNDDTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDV AGKIYHNIGYKEINEWTILFK >Mature_261_residues MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNKSTLIIYSFKNNFNIGEMKNH IKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEIKEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYI EERKVHLKEGNVRAYFIRNDDTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDV AGKIYHNIGYKEINEWTILFK
Specific function: Unknown
COG id: COG3393
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30616; Mature: 30616
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNK CEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECC STLIIYSFKNNFNIGEMKNHIKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEI CEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHH KEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYIEERKVHLKEGNVRAYFIRND HHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCEEEEEEECC DTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDV CCEEEEHHCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCEEEECCCC AGKIYHNIGYKEINEWTILFK CCHHHHCCCCEECCCEEEEEC >Mature Secondary Structure MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNK CEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECC STLIIYSFKNNFNIGEMKNHIKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEI CEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHH KEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYIEERKVHLKEGNVRAYFIRND HHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCEEEEEEECC DTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDV CCEEEEHHCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCEEEECCCC AGKIYHNIGYKEINEWTILFK CCHHHHCCCCEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA