| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699028
Identifier: 126699028
GI number: 126699028
Start: 1653165
End: 1653404
Strand: Direct
Name: 126699028
Synonym: CD1423
Alternate gene names: NA
Gene position: 1653165-1653404 (Clockwise)
Preceding gene: 126699027
Following gene: 126699032
Centisome position: 38.53
GC content: 27.08
Gene sequence:
>240_bases GTGAAATGTTCTAATTGTGGAAGTGTAAATATTGAAAAGGGAATTTTAACAACTGGTGGCATATATGCTGAAACTATTGG GTTAAAATATAGAGGAGATAGAAAATTAGATAAAGTTATAAATAAAACTTTTCCAGTACAATCTACTATATATTCAGATT TATGTTTAGATTGTGGCGAAATAGTTAGAACCTATATAAAGGATAATATTGATAGGAATTGGTGTAAAGATAAGAAATAG
Upstream 100 bases:
>100_bases GATTTGCCACCGATTTGTCACTGTGTTATAAAATCGGTAGCAAATTATATTTTAAATTATAAGATAGCATGAAAAAATAA TTGTTTAGGGGGTTATAAAT
Downstream 100 bases:
>100_bases AATAATTTTTGAAGTATATTAATATTTGAAGTTGAATTTTATTAAAGATATAAGTGAAAAAGTATAAATGGGAAGAAATT GTTATATGGAAGAAACTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDRKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNIDRNWCKDKK
Sequences:
>Translated_79_residues MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDRKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNIDRNWCKDKK >Mature_79_residues MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDRKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNIDRNWCKDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8952; Mature: 8952
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDRKLDKVINKTFPVQSTIYSDLCLDCGE CCCCCCCCCCCCCCEECCCCEEEHHCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH IVRTYIKDNIDRNWCKDKK HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDRKLDKVINKTFPVQSTIYSDLCLDCGE CCCCCCCCCCCCCCEECCCCEEEHHCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH IVRTYIKDNIDRNWCKDKK HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA