| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is kipA [H]
Identifier: 126698990
GI number: 126698990
Start: 1605727
End: 1606713
Strand: Direct
Name: kipA [H]
Synonym: CD1387
Alternate gene names: 126698990
Gene position: 1605727-1606713 (Clockwise)
Preceding gene: 126698989
Following gene: 126698991
Centisome position: 37.43
GC content: 32.52
Gene sequence:
>987_bases ATGGGATTCAAAGTTGAATTAGGAGGTTTCCAAACATTAATACAAGACAGAGGTAGAGTTGGCTATGGTCAATATGGTGT ATCTGGATGTGGAGCAATGGATGAGTATGCACATAGAGTAGGAAATATATTAGTAGGAAATTCTGAAGATGAGGCTTCCT TAGAAGTTTTAATGTTAGGTCCTACAATTACCTTTGATGAATATACGCAAATAGCAGTAACTGGGGGAGATTTAGGGGCT AAAATAAATGGAAAAGAAATTCAAAACTGGAGGTCATATCAAATAAATCCAGGTGATGTATTATCATTTAGAGGTGTGAA ATCAGGTGCTAGAGCCTATGTGTCAATAGCTGGTGGAATAGATGTTCCACTTGCAATGGGAAGTAAGTCAACTTATACAA GAGCTAAAATTGGTGGATTTGAAGGTAGAGCACTTAAAAAAGGAGATTATATAAATACTTTTATTCAGGAAAAAGATTTT ACAATAAATAAAAAATTAAGTTCAAAATATATTCCAACTTATAGTTCAGAAATCGTACTAAGAATTGTAAAAGGTCCTCA ATTTGATGCTTTTTCTAACGGTGAAGTAGAGAAATTTTTATCAAATAAATACAAAGTTACGAATGAAATAGATAGAATGG GTTGTAGACTAGATGGAGAGAGTATAAAGCACCTTAATGGAGCAGATATTATATCTGATGGTATTTCTTATGGAGCTATA CAAGTACCTGGTCATGGAAAACCGATTATAATGTTATCAGATAGACAGACTAGTGGTGGCTATACTAAGATAGGGAACGT TATAAGTGTAGATTTGTATAAGTTAGCACAAGCAAAGCCAAATGATGTAGTAAAATTTGAACTTGTAGATATATATGAAG CACATAGACTATTGAGAGAGCAAGAAGATAAGATTCAAGATATCTACAAGAGTATGAAAAATATAAGAGTTGTAAAGGCA AAAGTATTAAATGATATAGCAGTTTAA
Upstream 100 bases:
>100_bases ATTTTATAAAATTTGTTCCAATAACATTAGATGAATTTATAGAAATCGAAAAAAATAACTTAAGTATTTAAATATCGTTA TAGTACAGGGAGTGGTATAT
Downstream 100 bases:
>100_bases TTTAATTTTAACAAATACAATTTTTATTATAATTTATAATATAACTTACAAATAGCTATTTACTATTTACCATAATTAAG ATGGTTTAGATTAGTCAAAT
Product: allophanate hydrolase subunit 2
Products: ADP; phosphate; urea-1-carboxylate
Alternate protein names: Protein kipA [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MGFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLGPTITFDEYTQIAVTGGDLGA KINGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGIDVPLAMGSKSTYTRAKIGGFEGRALKKGDYINTFIQEKDF TINKKLSSKYIPTYSSEIVLRIVKGPQFDAFSNGEVEKFLSNKYKVTNEIDRMGCRLDGESIKHLNGADIISDGISYGAI QVPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKPNDVVKFELVDIYEAHRLLREQEDKIQDIYKSMKNIRVVKA KVLNDIAV
Sequences:
>Translated_328_residues MGFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLGPTITFDEYTQIAVTGGDLGA KINGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGIDVPLAMGSKSTYTRAKIGGFEGRALKKGDYINTFIQEKDF TINKKLSSKYIPTYSSEIVLRIVKGPQFDAFSNGEVEKFLSNKYKVTNEIDRMGCRLDGESIKHLNGADIISDGISYGAI QVPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKPNDVVKFELVDIYEAHRLLREQEDKIQDIYKSMKNIRVVKA KVLNDIAV >Mature_327_residues GFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLGPTITFDEYTQIAVTGGDLGAK INGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGIDVPLAMGSKSTYTRAKIGGFEGRALKKGDYINTFIQEKDFT INKKLSSKYIPTYSSEIVLRIVKGPQFDAFSNGEVEKFLSNKYKVTNEIDRMGCRLDGESIKHLNGADIISDGISYGAIQ VPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKPNDVVKFELVDIYEAHRLLREQEDKIQDIYKSMKNIRVVKAK VLNDIAV
Specific function: Counteracts the inhibitory action of kipI on sporulation. May bind to kipI, preventing its function as an inhibitor of kinase A [H]
COG id: COG1984
COG function: function code E; Allophanate hydrolase subunit 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786930, Length=313, Percent_Identity=31.629392971246, Blast_Score=185, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319685, Length=319, Percent_Identity=34.7962382445141, Blast_Score=166, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003778 [H]
Pfam domain/function: PF02626 AHS2 [H]
EC number: 6.3.4.6
Molecular weight: Translated: 36031; Mature: 35899
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLG CCEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCEEEEEEC PTITFDEYTQIAVTGGDLGAKINGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGI CEEEECCCEEEEEECCCCCCEECCHHHCCCCCEECCCCCEEEECCCCCCCEEEEEEECCC DVPLAMGSKSTYTRAKIGGFEGRALKKGDYINTFIQEKDFTINKKLSSKYIPTYSSEIVL CCEEEECCCCCCCEEECCCCCCCEECCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEE RIVKGPQFDAFSNGEVEKFLSNKYKVTNEIDRMGCRLDGESIKHLNGADIISDGISYGAI EEECCCCCCCCCCCCHHHHHCCCEEEHHHHHHHCCEECCHHHCCCCCCHHHHCCCCCCEE QVPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKPNDVVKFELVDIYEAHRLLRE EECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH QEDKIQDIYKSMKNIRVVKAKVLNDIAV HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLG CEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCEEEEEEC PTITFDEYTQIAVTGGDLGAKINGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGI CEEEECCCEEEEEECCCCCCEECCHHHCCCCCEECCCCCEEEECCCCCCCEEEEEEECCC DVPLAMGSKSTYTRAKIGGFEGRALKKGDYINTFIQEKDFTINKKLSSKYIPTYSSEIVL CCEEEECCCCCCCEEECCCCCCCEECCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEE RIVKGPQFDAFSNGEVEKFLSNKYKVTNEIDRMGCRLDGESIKHLNGADIISDGISYGAI EEECCCCCCCCCCCCHHHHHCCCEEEHHHHHHHCCEECCHHHCCCCCCHHHHCCCCCCEE QVPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKPNDVVKFELVDIYEAHRLLRE EECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH QEDKIQDIYKSMKNIRVVKAKVLNDIAV HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; urea; CO2
Specific reaction: ATP + urea + CO2 = ADP + phosphate + urea-1-carboxylate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 10568751 [H]