Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is ycsG [H]

Identifier: 126698988

GI number: 126698988

Start: 1603762

End: 1604982

Strand: Direct

Name: ycsG [H]

Synonym: CD1385

Alternate gene names: 126698988

Gene position: 1603762-1604982 (Clockwise)

Preceding gene: 126698987

Following gene: 126698989

Centisome position: 37.38

GC content: 31.37

Gene sequence:

>1221_bases
ATGAGTACAAAAAATATTACAGATAAAACTAAAAATAAAAAAGATGTCGGAGCACTTATAGGGGCTGCATTTATAATGGC
AACATCAGCAATTGGACCAGGGTTTTTAACTCAGACTGCACAATTTACCCAAGATTTTGGACCGAATTTTTCATTTGTAA
TTTTAATTACAACAATCCTTTTTATAGGGGCTCAAGTAAATGTATGGAGAGTAATTGGTGTATCAGGACTTAGAGGTCAG
GATATAGCAAATAAAATAATACCTGGATTAGGCTATTTAGTAGCTTTTTTAGTAGCTCTTGGAGGATTAGCTTTTAATAT
AGGAAATGTTGGTGGAGCTGCACTTGGTATGAATGTAATGTTTAATATGAATATGACATTAGGAACTGTATTAAGTGGAT
TAATAGCTATATTTGTATTTATGTCAAAAAATTCAAATTCTCTAGTCGATAAGATAACTAAATTTTTAGCATTAGGAATG
ATAATTATAGTTGGATATGTAGCAATATCAAATCATCCTCCTGTTGGAGAGGCAGTATCAAGAATGGTAAAACCAGAAAA
TCCAAAAGGACTGATATTCCCAATAATAACTTTACTTGGAGGAAGTGTTGGAGGTTATATAACTTTTGCTGGAGGACATA
GATTAATAGACGGTGGAATAACAGGAGAAGAAAATATAAAAGAAATAACTAAATCTTCTCTTTTGGGTATATTAGTTGCC
ACAATGATGAGAGTTCTTTTATTTTTAGCAATACTGGCAGTGGTTTCAAAAGGTCTTCAACTTGACCCAGAAAATCCAGC
TGCTTCAGCTTTTAAATTTAGTGCAGGAGCAATAGGATATAAATTCTTTGGACTTGTATTATGGTCTGCTGCAATTACAT
CAGTTATAGGAGCTGCTTATACATCAGTTTCTTTCTTAAAGACACTAAATCCTTTTATAGATAAATATGAAAAATATTTT
ATAATAGCATTTATAGCAATATCAACACTTATAATGGCATTTATAGGAAAACCAGCTACTTTATTAATTTTAGCAGGAGC
TTTAAATGGATTGATACTTCCAATCACATTAGGAATTATGCTTATAGCATCTAAAAGAAAAGATATTGTTGGAGATTACA
AGCATCCTACATGGCTTTTAATATTTGGATTAATAGTAGTTTTAATATCTGCATATACAGGAATAACTTCTCTTAGCAGC
CTAGGTGCTTTATTTGCTTAA

Upstream 100 bases:

>100_bases
TTTGAATTAGAAAGTATAGAAGTTTGTCCATTAGAAAACATAGAAGTTTGTTCGTCAGAGAACATAGTATAAGACTGATA
ACATGAGGGGGAGATAAAAT

Downstream 100 bases:

>100_bases
TTTAGAAGAGGTGACATTTATGGAAACTAGATACTTGATATCAGGGGATAAGGCAGTGGTTGCTGAATTTGGAAATGAGA
TATCAGAAGATATAAACAAA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSTKNITDKTKNKKDVGALIGAAFIMATSAIGPGFLTQTAQFTQDFGPNFSFVILITTILFIGAQVNVWRVIGVSGLRGQ
DIANKIIPGLGYLVAFLVALGGLAFNIGNVGGAALGMNVMFNMNMTLGTVLSGLIAIFVFMSKNSNSLVDKITKFLALGM
IIIVGYVAISNHPPVGEAVSRMVKPENPKGLIFPIITLLGGSVGGYITFAGGHRLIDGGITGEENIKEITKSSLLGILVA
TMMRVLLFLAILAVVSKGLQLDPENPAASAFKFSAGAIGYKFFGLVLWSAAITSVIGAAYTSVSFLKTLNPFIDKYEKYF
IIAFIAISTLIMAFIGKPATLLILAGALNGLILPITLGIMLIASKRKDIVGDYKHPTWLLIFGLIVVLISAYTGITSLSS
LGALFA

Sequences:

>Translated_406_residues
MSTKNITDKTKNKKDVGALIGAAFIMATSAIGPGFLTQTAQFTQDFGPNFSFVILITTILFIGAQVNVWRVIGVSGLRGQ
DIANKIIPGLGYLVAFLVALGGLAFNIGNVGGAALGMNVMFNMNMTLGTVLSGLIAIFVFMSKNSNSLVDKITKFLALGM
IIIVGYVAISNHPPVGEAVSRMVKPENPKGLIFPIITLLGGSVGGYITFAGGHRLIDGGITGEENIKEITKSSLLGILVA
TMMRVLLFLAILAVVSKGLQLDPENPAASAFKFSAGAIGYKFFGLVLWSAAITSVIGAAYTSVSFLKTLNPFIDKYEKYF
IIAFIAISTLIMAFIGKPATLLILAGALNGLILPITLGIMLIASKRKDIVGDYKHPTWLLIFGLIVVLISAYTGITSLSS
LGALFA
>Mature_405_residues
STKNITDKTKNKKDVGALIGAAFIMATSAIGPGFLTQTAQFTQDFGPNFSFVILITTILFIGAQVNVWRVIGVSGLRGQD
IANKIIPGLGYLVAFLVALGGLAFNIGNVGGAALGMNVMFNMNMTLGTVLSGLIAIFVFMSKNSNSLVDKITKFLALGMI
IIVGYVAISNHPPVGEAVSRMVKPENPKGLIFPIITLLGGSVGGYITFAGGHRLIDGGITGEENIKEITKSSLLGILVAT
MMRVLLFLAILAVVSKGLQLDPENPAASAFKFSAGAIGYKFFGLVLWSAAITSVIGAAYTSVSFLKTLNPFIDKYEKYFI
IAFIAISTLIMAFIGKPATLLILAGALNGLILPITLGIMLIASKRKDIVGDYKHPTWLLIFGLIVVLISAYTGITSLSSL
GALFA

Specific function: Unknown

COG id: COG1914

COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NRAMP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001046 [H]

Pfam domain/function: PF01566 Nramp [H]

EC number: NA

Molecular weight: Translated: 42810; Mature: 42679

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKNITDKTKNKKDVGALIGAAFIMATSAIGPGFLTQTAQFTQDFGPNFSFVILITTIL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
FIGAQVNVWRVIGVSGLRGQDIANKIIPGLGYLVAFLVALGGLAFNIGNVGGAALGMNVM
HHCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCHHHCCEEE
FNMNMTLGTVLSGLIAIFVFMSKNSNSLVDKITKFLALGMIIIVGYVAISNHPPVGEAVS
EECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RMVKPENPKGLIFPIITLLGGSVGGYITFAGGHRLIDGGITGEENIKEITKSSLLGILVA
HHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHH
TMMRVLLFLAILAVVSKGLQLDPENPAASAFKFSAGAIGYKFFGLVLWSAAITSVIGAAY
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TSVSFLKTLNPFIDKYEKYFIIAFIAISTLIMAFIGKPATLLILAGALNGLILPITLGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH
LIASKRKDIVGDYKHPTWLLIFGLIVVLISAYTGITSLSSLGALFA
HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STKNITDKTKNKKDVGALIGAAFIMATSAIGPGFLTQTAQFTQDFGPNFSFVILITTIL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
FIGAQVNVWRVIGVSGLRGQDIANKIIPGLGYLVAFLVALGGLAFNIGNVGGAALGMNVM
HHCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCHHHCCEEE
FNMNMTLGTVLSGLIAIFVFMSKNSNSLVDKITKFLALGMIIIVGYVAISNHPPVGEAVS
EECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RMVKPENPKGLIFPIITLLGGSVGGYITFAGGHRLIDGGITGEENIKEITKSSLLGILVA
HHCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHH
TMMRVLLFLAILAVVSKGLQLDPENPAASAFKFSAGAIGYKFFGLVLWSAAITSVIGAAY
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TSVSFLKTLNPFIDKYEKYFIIAFIAISTLIMAFIGKPATLLILAGALNGLILPITLGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH
LIASKRKDIVGDYKHPTWLLIFGLIVVLISAYTGITSLSSLGALFA
HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8969502 [H]