Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698975

Identifier: 126698975

GI number: 126698975

Start: 1587586

End: 1592817

Strand: Direct

Name: 126698975

Synonym: CD1374

Alternate gene names: NA

Gene position: 1587586-1592817 (Clockwise)

Preceding gene: 126698974

Following gene: 126698976

Centisome position: 37.0

GC content: 28.12

Gene sequence:

>5232_bases
ATGAAGCAAAATAAACTTTTACAGCGTGGTGCTTATTTTAATGATAAGAACATATTGATTGATGATTTTGATAAAAGATA
TAATGATTATGATTTTGTAGAATTTTTTACTGGTATAAGTAATAGTACCTTTGGTTTAAAATCAGATGGTAATTTATATG
CTTGTGGCGATAATACAGGTTTTCAACTAGGACTTGGAAAAGATTCGTCAGAGAGAAGGATGTTTAGTAAAGTAAAAATT
GATAATGTAAAATATGTATCTTGTGGTTCAAAACACAGTGTAGCAGTAACTAAAGATGGATTTGCATATGGAGCAGGAAC
AAGTAATGTAGGTCAATTAGGTGTAATTGAGTCTACAGTATATTATGAATTTACTAAGCTACCAATAGATGATGTAAAAA
CTGTTGCATGTGGTTATGATTTTACATTTGTACTTAAAAATGATGGAACATTATATTCAGCAGGTTTAAACTCAAGTGGT
CAACTTGGATTAGGTGATACTAACAATAGAGTTACTTTCACTAAAGTAAATATAGATAGTGTAAAAGATGTAGTGACTTA
TAATCAATCTGTATTCATCATAAAAATGGATGGGACAGCACATGCATGTGGATTAAATTCAAATGGGCAGTTGGGAATTA
ATAGTACTTTAAATAAAAGTGTATTTAATAAAATAGAAGGTATGGATAATGTAAAACAGATAGCGTGTGGTAGTAGTCAT
ACAATTCTTATTAAGAATGATGGAACTATGTATACTACAGGTTCTAATGGTTATGGTCAACTTGGTACAGGAAATAATAA
TAATTCAATTGTATTTACTCTTTCTAGTATAAATAATGTTAAGTATGCTTCTTGTGGAAATAATCATACTATGATATTAA
AATACGATAATACACTATTTAGTACAGGACAAAACAATTATGGTCAACTAGCCAATGCCAATAAAGATGTAGCATCAAGA
AATACTTTTGTTAAGGTTAATGTAGAAAATATAAAAGATATTAAGTGTGGTTCTCAATTTAATTTTTTAATAAATGGTTC
AAAGGAGATATTTGTATCTGGCTGTAATTTAGCAGGTCAACTTGGTTCATTTTTTCATACAACTTTTCTGTATGAGTTTT
CAAAGGTGCAATCTTCAAATTTAGATAATTATTCAGGTTTATTGGTTAATGATGATTATTTGTATGTTACAAAGGATAAT
AGTGAATTTTTAAATGTAAAGTTAAGTGATAATTTTCAGGATTATAAGAAGATAGAGTTAACAGATAATAATATGTTTAT
TGTTATGAATGATGGTACATTGTATGCTTGTGGTTTAAATAATTATGGTCAGTTAGGACTGGGGGATACTGTTAACAGGT
CAGTTATGACTAAGGTGGATATAGATAATGTTTTGGATATAAAGGGAAATGGAAACTCAACTTTTGTACTTAAGAATAAT
GGAACTTTATATTCTTGTGGATATAATAGTTCAGGTATATTGGGATTAAAAGATAATACAAATAGAAATATATTTACAAA
AATTGAGATAGAAAATATTAAGGAATTTTGTGTAGAAAGTAACTATATTGTAGCATTAAATCATTCAAAGGAATTATATG
GGTGGGGTAATCAATCTTATATAGTTTATGGTGATAATAGAAACTACCCTTACAAAGATACTAGAGTTAGTAATGTAGAA
AAAATAGCTACGTGGAGTGATACTTTGTATATATTAGATTCAACTGGAGCTACTAAGACTATAGGATACTCTTATAATGG
TAGTGGAGGATACCCAGCTCCTAGTTCTAGTTCAACATATAGGGAAGGTGGGTATATTAATAAGAATACATCATACAGAA
CTTTGGAATTTTATAATACAAGTAAAACTAAATTAGTGAATCTATTTGCTTTTTATAATGGCTGTGTATTTGTTGATGAA
AATGGATTAGCTTATTGTATAGGGGAAAATAATATTAATTTCAGAGGCGGTTCAACAACAAATGAAAACAATAGTCTCAG
ATTTATCAATAATTCAGGTGTATATTATACTAATACAGACGGAACAGACTATACTTGCTATCAATGGACATATAAATTAA
TTCGTTGTTCTATTTTTGATAGTCCCCAAAATATTATAGGAAATAGTAAAAACATATTATACTTATCAAAAAATAATTCT
ACATTTAAATGTACAGGAAATTGTATAACTTATGGAATAAATAGTCAAAATTGGTATAGTTATTTTAGTGATAGCAGTAA
TGGTGCAATAGCATTAGGTAATGAGTTTATACTAAAAAATTATTCTGGGGAATGTTTGTTAAAAGGGTATGGTAAAGCTA
CTAATGGAGAATTTGGAAATTCAACTAATATAAGTAGTATTAGTAATTATGATACAGGATTAAAAGATATAAAAGATATA
ATTGTAAAAAATAACACTGTAGTAGTAGTAGATAAAAACAACAATATATATGTAACAGGAGCAAATCAATTTAACAAACT
TGGTATAGGAGAATATAACAATCAACCAATAAGAAAATTCACAAATATAACTGAACAATCAAACTCATTTATATTTATGG
ATGATATAAAAGAAATTACAACATCAAGAAATACAATGTTTATAGTAAAAAATGATGGAACAGCCTATGCCACAGGAAAT
AATAGTTCTGGACAATTAGGATTAGGTGACACAATAAATAGAAATAAGTTCACTCAGATAAACCTTGATAATATAAAGAA
AATATCAACAAGTATAGATGGTAACACAACATTTGCAATTAGAAATGATGGAACACTATACTCCACAGGATTAAATACCA
AAGGACAACTGGGATTAGGTGATATAGTAAATAGAAATACATTTACCAAAGTAAACATCCAAAATGTAAGAGATGTTGTT
TTAGGGACTACTCACTCGCATGCAATCAAAGATGATAACACATTATATTCATGTGGAGAAAACACTCATGGGCAACTGGG
CTTAGGAAGCGAAAGCAACCATCCAGACGTATTGACATTTACTGTAAACAATATAACTAATGTAAGAGATGTGTACTGCT
CAGATACAACAACATTTATTGTAAAGGACACAAACATTGCATATTGTTGTGGATACAATAATAATTCACAATTAGGTATG
GGAAATACTACTGACCAGTATAGTTTTATAAAGTGTATGGAAAATGTAAAAGAAGTTATACCAAATGAAATAAATACCTA
TATAATAACAATCTATAATACTGCATATAGTACAGGTTTAAATACTGATTATTGCTTAGGTCTAAATAGTAATAGCAATC
AAAGTTCATTTTCTGAAATTCCAATTTCAAATGTAGTAAAAGTAGCTCCAAACAGAAATAATGCAGTACTTTTACTTACA
AGTGAAGGGGATGTATATACTGCAGGTAAATGTAGTAATGGTTCAGGTACAGGAAGTGAGACTCCAGAGAAGATTAAAAA
AATAGCATCAAAGGCAAAGGACATTGGAATGAATTATAGATGTGGACATTATGTAAGTGATAATGGAGACCTATATGGTA
CAGGTTTTAATGATTGTGGGCAATTAGGTGTTGGTAATGTAACAAAAAGAGATACATTTATAAAAACCAATACAAGAGTA
AAGAAAATACTTCCTTTAGAATATGCAAATATAGCAATAAAAGATACTAATGATATATATATTTGTGGATTAAATAACTA
TGGACAATTAGGTGTTGGAAATAGATACGATAGTAGAAATAATGATAATAGAATATTTAATTATAAGCATATGAATTTTG
TAATGGGAGATTTGACATCTATTAAAAACAGACATAACTTTATACTTCTAAACAATAAGATAGTTATACCTACCACAAAA
GACATAGATTATGGTTTAGTATTAGGAAATTTATACAAAGGAGACCTTTATACTGAGCTTCCATATGAAGATATAAAAGA
AGTATCTATTTCTAAGACTCATATTATTATATTACTTAATGATGGAACAATGTATGGATGTGGTACAAACTACCATGGAG
AATTATTGCAAGACTTGTCTATAAATCAAGTGGATGAATTTGTGCAGATTAATGTATCAGATGTAAAGCATGTTTCATGT
GGAGATAACTTTACTTACTTTATAAAATCTGATGATAGTCTTTGGTCTATTGGTAAAAATTCCGAATATCAATTAGGTAT
AGGTCACAATAATCCAGTTACTGAATTACAAAGAATTACAACTATATCTAGCTGTAAAGAAGTACATTGTGGTAAAAACT
ATACATTAGTAGTAACTACAAGTAATGAATTATTTGTACAAGGATATAATGATAAGGGAGCTTTAGGATTAGGAAGCGAT
AGTGAAAATACTATAATTAAGTTCTTTACAAAAGCACTAACAGACATAAGAGAAATAAAATCTTATGGAAGTGACCATAT
ATTAGTACTTAAAAATGATAATTCAGTATGGGTTACTGGAAAAAATAGGGATGTATATAAAATTGAACAACCAGTAGAAT
TTTTAAAAGAATTTACTATAGTACCTATTTCTGAAGATGTAAATACAGTAAAGGATGTACTTGCAACAGACAATACATTA
TATATTATATCAGAAGTAGGAACGACAAATGCTGCTATAGAAATTACTGAAAAATCAATTTCATCAATTAAGATAAAAAT
ACAAGACCCTAATAAAGATATAAGTAGAATAGAAATGCTTATAAATGGTGAAAGTGTAAAATCTGTAAGTGATTTAATTA
CTGAAAAAATATCATTTGAAGTACCACCAGATAAAATTAAAATAGGAGAGAATAAGATACTATTTAGAGCTTATTGTAAA
GGTGATGATTTATATGCATCTTTATTTATTTTTAAAGAGAGTACTGGAAATTCTATAATTAAAGATTCTTATGTTATGAT
AGGTAATAGAATGTACAAGGTAGTTAATACAACATCTAATGAACAAGATATTACAATTACACTAGATAGAGGGCTTGAAG
AAGATTTAAATCTTGGAGACCCTATATATCAATTAATAAATAAAACTAAAGTTCAAGTAAAAATAAATAAATCTGACTTA
TTCAAAGACATGAAACTAGTTGAAATCAAAAAATCAGACTCAAGTTACCAAGAAATCTATGAATTAGAAGAAGCCAACAT
AAAAAGTGCTCAGCCTAAAATCATAGTAGAAAAAGGAGATAAATGGACAGCTATAAAACGTCCATCTATGATTTTTAGAT
ATGATGCTGAAAACAACGAGCCACAAGCTTAA

Upstream 100 bases:

>100_bases
TGAGACAAAATCTAGCAACACTTATTTAAAAGAACAAAAAGATATAACTCTAAATAAGTATTCGTATGAAATAAGATAAA
TAAAGGGGGTAGTACTAATA

Downstream 100 bases:

>100_bases
AATGGAGGTATGAAAATTGTTTAAATTCGATAAAAATAAAATAGAACAAATCAAACAAGGTAGAAAAGTAGAAATGCAGT
ATAAAGACATTTCAGACATA

Product: hypothetical protein

Products: NA

Alternate protein names: BNR Repeat-Containing Protein; Alpha-Tubulin Suppressor; S-Layer Domain Protein; RCC1 Repeat-Containing Protein; BNR Repeat Containing Protein; Cell Wall Anchor Domain-Containing Protein; UVB-Resistance; S-Layer Domain-Containing Protein; BNR Repeat Domain Protein; Bnr Repeat Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; RCC1 Domain-Containing Protein; Rhs Family Protein; Ig Domain-Containing Domain-Containing Protein; Cell Surface Receptor IPT/TIG Domain-Containing Protein; IPT/TIG Domain Protein; RCC1 Domain-Containing Protein Alpha-Tubulin Suppressor; Copper Amine Oxidase Domain Protein; Ig Domain Domain Protein; Hyalin; Outer Membrane Adhesin Like Protein; Regulator Of Chromosome Condensation Domain Protein; Beta-Lactamase Inhibitory Protein II; RCC1 Repeat- And Reductase Domain-Containing Protein; Cellulosome Dockerin Type I; RCC1 Repeat Protein; Ig Family Protein; Fibronectin Type III Domain-Containing Protein; RCC1 Repeats Protein; Regulator Of Chromosome Condensation-Like Protein; ATS1 Domain Repeat Protein; Copper Amine Oxidase Domain-Containing Protein; Lipoprotein; BNR Repeat Domain-Containing Protein

Number of amino acids: Translated: 1743; Mature: 1743

Protein sequence:

>1743_residues
MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKI
DNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSG
QLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH
TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASR
NTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDN
SEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN
GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVE
KIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDE
NGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS
TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDI
IVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGN
NSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV
LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGM
GNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLT
SEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV
KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTK
DIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSC
GDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD
SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTL
YIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCK
GDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL
FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA

Sequences:

>Translated_1743_residues
MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKI
DNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSG
QLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH
TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASR
NTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDN
SEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN
GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVE
KIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDE
NGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS
TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDI
IVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGN
NSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV
LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGM
GNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLT
SEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV
KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTK
DIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSC
GDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD
SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTL
YIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCK
GDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL
FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA
>Mature_1743_residues
MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKI
DNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSG
QLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH
TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASR
NTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDN
SEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN
GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVE
KIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDE
NGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS
TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDI
IVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGN
NSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV
LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGM
GNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLT
SEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV
KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTK
DIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSC
GDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD
SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTL
YIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCK
GDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL
FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA

Specific function: Unknown

COG id: COG5184

COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI63025188, Length=332, Percent_Identity=30.1204819277108, Blast_Score=118, Evalue=6e-26,
Organism=Homo sapiens, GI37620181, Length=332, Percent_Identity=30.1204819277108, Blast_Score=118, Evalue=6e-26,
Organism=Homo sapiens, GI4506581, Length=294, Percent_Identity=30.6122448979592, Blast_Score=116, Evalue=2e-25,
Organism=Homo sapiens, GI78190492, Length=294, Percent_Identity=30.6122448979592, Blast_Score=115, Evalue=3e-25,
Organism=Homo sapiens, GI7657152, Length=304, Percent_Identity=27.9605263157895, Blast_Score=111, Evalue=7e-24,
Organism=Homo sapiens, GI57242759, Length=276, Percent_Identity=30.4347826086957, Blast_Score=104, Evalue=1e-21,
Organism=Homo sapiens, GI126131099, Length=372, Percent_Identity=28.2258064516129, Blast_Score=100, Evalue=2e-20,
Organism=Homo sapiens, GI4557445, Length=277, Percent_Identity=28.8808664259928, Blast_Score=100, Evalue=2e-20,
Organism=Homo sapiens, GI61563742, Length=323, Percent_Identity=28.1733746130031, Blast_Score=100, Evalue=2e-20,
Organism=Homo sapiens, GI259089405, Length=323, Percent_Identity=28.1733746130031, Blast_Score=100, Evalue=2e-20,
Organism=Homo sapiens, GI126032348, Length=344, Percent_Identity=25.5813953488372, Blast_Score=98, Evalue=6e-20,
Organism=Homo sapiens, GI222136641, Length=319, Percent_Identity=26.3322884012539, Blast_Score=95, Evalue=5e-19,
Organism=Homo sapiens, GI110825982, Length=241, Percent_Identity=28.6307053941909, Blast_Score=86, Evalue=3e-16,
Organism=Homo sapiens, GI13540582, Length=252, Percent_Identity=29.3650793650794, Blast_Score=82, Evalue=4e-15,
Organism=Homo sapiens, GI30039692, Length=269, Percent_Identity=24.1635687732342, Blast_Score=82, Evalue=4e-15,
Organism=Homo sapiens, GI4502801, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14,
Organism=Homo sapiens, GI114796646, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14,
Organism=Homo sapiens, GI114796644, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14,
Organism=Homo sapiens, GI114796642, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14,
Organism=Homo sapiens, GI209969703, Length=234, Percent_Identity=25.2136752136752, Blast_Score=77, Evalue=2e-13,
Organism=Homo sapiens, GI29789090, Length=234, Percent_Identity=25.2136752136752, Blast_Score=77, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71988539, Length=291, Percent_Identity=28.5223367697594, Blast_Score=92, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17510153, Length=473, Percent_Identity=24.3128964059197, Blast_Score=91, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24655113, Length=289, Percent_Identity=30.1038062283737, Blast_Score=116, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24655115, Length=289, Percent_Identity=30.1038062283737, Blast_Score=116, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281361147, Length=233, Percent_Identity=26.6094420600858, Blast_Score=99, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24649791, Length=272, Percent_Identity=26.8382352941176, Blast_Score=85, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24582121, Length=330, Percent_Identity=25.1515151515152, Blast_Score=79, Evalue=4e-14,
Organism=Drosophila melanogaster, GI20129257, Length=330, Percent_Identity=25.1515151515152, Blast_Score=79, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24580714, Length=361, Percent_Identity=25.207756232687, Blast_Score=70, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 193604; Mature: 193604

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00626 RCC1_2 ; PS50012 RCC1_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTG
CCCCHHHHCCCEECCCCEEEECHHCCCCCCCHHHHHHCCCCCCCEECCCCCEEEECCCCC
FQLGLGKDSSERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTV
EEEEECCCCHHHHHHHEEEECCEEEEECCCCCEEEEEECCEEECCCCCCCCCEEEEEEEE
YYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSGQLGLGDTNNRVTFTKVNIDS
EEEEEECCHHHCEEEEECCEEEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEEHHH
VKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH
HHHHEEECCEEEEEEECCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHCCCCC
TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLF
EEEEECCCEEEEECCCCCEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCEEE
STGQNNYGQLANANKDVASRNTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQ
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCCHHH
LGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIEL
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCEEEEEEECCCCCCCEEEEE
TDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN
ECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECC
GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSY
CEEEECCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCCCCEEEEECCCCEEEECCCCEE
IVYGDNRNYPYKDTRVSNVEKIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTY
EEECCCCCCCCCCCCCCCHHEEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
REGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDENGLAYCIGENNINFRGGSTT
CCCCEECCCCCEEEEEEECCCCHHEEEEEEEECCEEEEECCCEEEEEECCCEEECCCCCC
NENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS
CCCCCEEEEECCCEEEECCCCCCEEEHHEEEEEEEEEECCCCHHHCCCCCCEEEEECCCC
TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGN
EEEEECCEEEEECCCCCEEEEECCCCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCC
STNISSISNYDTGLKDIKDIIVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKF
CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH
TNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQI
HCHHHCCCCEEEEECHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEE
NLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV
EHHHHEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCCEEE
LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFI
EECCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEECCCEEEE
VKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGL
EEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECEECCCC
NTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTGSE
CCEEEEEECCCCCCCCHHCCCCCCEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCC
TPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV
CHHHHHHHHHHHHHCCCCEECCEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCE
KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTS
EEEECEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEHHHHH
IKNRHNFILLNNKIVIPTTKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLN
HCCCCCEEEECCEEEEECCCCCCEEEEEECEECCCEEEECCHHHHHHCEECCEEEEEEEC
DGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSCGDNFTYFIKSDDSLWSIGKN
CCEEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHEEEEECCCCEEEEEECCCCEEECCCC
SEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD
CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCEECCCC
SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTI
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEEEHHHHHHHHCCEE
VPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEML
EEECCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCEEEEEE
INGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSII
ECCCHHHHHHHHHHHHEEECCCCCCEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEE
KDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL
ECCEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEECHHHH
FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNE
HCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCCC
PQA
CCC
>Mature Secondary Structure
MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTG
CCCCHHHHCCCEECCCCEEEECHHCCCCCCCHHHHHHCCCCCCCEECCCCCEEEECCCCC
FQLGLGKDSSERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTV
EEEEECCCCHHHHHHHEEEECCEEEEECCCCCEEEEEECCEEECCCCCCCCCEEEEEEEE
YYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSGQLGLGDTNNRVTFTKVNIDS
EEEEEECCHHHCEEEEECCEEEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEEHHH
VKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH
HHHHEEECCEEEEEEECCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHCCCCC
TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLF
EEEEECCCEEEEECCCCCEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCEEE
STGQNNYGQLANANKDVASRNTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQ
ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCCHHH
LGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIEL
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCEEEEEEECCCCCCCEEEEE
TDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN
ECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECC
GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSY
CEEEECCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCCCCEEEEECCCCEEEECCCCEE
IVYGDNRNYPYKDTRVSNVEKIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTY
EEECCCCCCCCCCCCCCCHHEEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
REGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDENGLAYCIGENNINFRGGSTT
CCCCEECCCCCEEEEEEECCCCHHEEEEEEEECCEEEEECCCEEEEEECCCEEECCCCCC
NENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS
CCCCCEEEEECCCEEEECCCCCCEEEHHEEEEEEEEEECCCCHHHCCCCCCEEEEECCCC
TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGN
EEEEECCEEEEECCCCCEEEEECCCCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCC
STNISSISNYDTGLKDIKDIIVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKF
CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH
TNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQI
HCHHHCCCCEEEEECHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEE
NLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV
EHHHHEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCCEEE
LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFI
EECCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEECCCEEEE
VKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGL
EEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECEECCCC
NTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTGSE
CCEEEEEECCCCCCCCHHCCCCCCEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCC
TPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV
CHHHHHHHHHHHHHCCCCEECCEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCE
KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTS
EEEECEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEHHHHH
IKNRHNFILLNNKIVIPTTKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLN
HCCCCCEEEECCEEEEECCCCCCEEEEEECEECCCEEEECCHHHHHHCEECCEEEEEEEC
DGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSCGDNFTYFIKSDDSLWSIGKN
CCEEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHEEEEECCCCEEEEEECCCCEEECCCC
SEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD
CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCEECCCC
SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTI
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEEEHHHHHHHHCCEE
VPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEML
EEECCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCEEEEEE
INGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSII
ECCCHHHHHHHHHHHHEEECCCCCCEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEE
KDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL
ECCEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEECHHHH
FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNE
HCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCCC
PQA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA