| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698975
Identifier: 126698975
GI number: 126698975
Start: 1587586
End: 1592817
Strand: Direct
Name: 126698975
Synonym: CD1374
Alternate gene names: NA
Gene position: 1587586-1592817 (Clockwise)
Preceding gene: 126698974
Following gene: 126698976
Centisome position: 37.0
GC content: 28.12
Gene sequence:
>5232_bases ATGAAGCAAAATAAACTTTTACAGCGTGGTGCTTATTTTAATGATAAGAACATATTGATTGATGATTTTGATAAAAGATA TAATGATTATGATTTTGTAGAATTTTTTACTGGTATAAGTAATAGTACCTTTGGTTTAAAATCAGATGGTAATTTATATG CTTGTGGCGATAATACAGGTTTTCAACTAGGACTTGGAAAAGATTCGTCAGAGAGAAGGATGTTTAGTAAAGTAAAAATT GATAATGTAAAATATGTATCTTGTGGTTCAAAACACAGTGTAGCAGTAACTAAAGATGGATTTGCATATGGAGCAGGAAC AAGTAATGTAGGTCAATTAGGTGTAATTGAGTCTACAGTATATTATGAATTTACTAAGCTACCAATAGATGATGTAAAAA CTGTTGCATGTGGTTATGATTTTACATTTGTACTTAAAAATGATGGAACATTATATTCAGCAGGTTTAAACTCAAGTGGT CAACTTGGATTAGGTGATACTAACAATAGAGTTACTTTCACTAAAGTAAATATAGATAGTGTAAAAGATGTAGTGACTTA TAATCAATCTGTATTCATCATAAAAATGGATGGGACAGCACATGCATGTGGATTAAATTCAAATGGGCAGTTGGGAATTA ATAGTACTTTAAATAAAAGTGTATTTAATAAAATAGAAGGTATGGATAATGTAAAACAGATAGCGTGTGGTAGTAGTCAT ACAATTCTTATTAAGAATGATGGAACTATGTATACTACAGGTTCTAATGGTTATGGTCAACTTGGTACAGGAAATAATAA TAATTCAATTGTATTTACTCTTTCTAGTATAAATAATGTTAAGTATGCTTCTTGTGGAAATAATCATACTATGATATTAA AATACGATAATACACTATTTAGTACAGGACAAAACAATTATGGTCAACTAGCCAATGCCAATAAAGATGTAGCATCAAGA AATACTTTTGTTAAGGTTAATGTAGAAAATATAAAAGATATTAAGTGTGGTTCTCAATTTAATTTTTTAATAAATGGTTC AAAGGAGATATTTGTATCTGGCTGTAATTTAGCAGGTCAACTTGGTTCATTTTTTCATACAACTTTTCTGTATGAGTTTT CAAAGGTGCAATCTTCAAATTTAGATAATTATTCAGGTTTATTGGTTAATGATGATTATTTGTATGTTACAAAGGATAAT AGTGAATTTTTAAATGTAAAGTTAAGTGATAATTTTCAGGATTATAAGAAGATAGAGTTAACAGATAATAATATGTTTAT TGTTATGAATGATGGTACATTGTATGCTTGTGGTTTAAATAATTATGGTCAGTTAGGACTGGGGGATACTGTTAACAGGT CAGTTATGACTAAGGTGGATATAGATAATGTTTTGGATATAAAGGGAAATGGAAACTCAACTTTTGTACTTAAGAATAAT GGAACTTTATATTCTTGTGGATATAATAGTTCAGGTATATTGGGATTAAAAGATAATACAAATAGAAATATATTTACAAA AATTGAGATAGAAAATATTAAGGAATTTTGTGTAGAAAGTAACTATATTGTAGCATTAAATCATTCAAAGGAATTATATG GGTGGGGTAATCAATCTTATATAGTTTATGGTGATAATAGAAACTACCCTTACAAAGATACTAGAGTTAGTAATGTAGAA AAAATAGCTACGTGGAGTGATACTTTGTATATATTAGATTCAACTGGAGCTACTAAGACTATAGGATACTCTTATAATGG TAGTGGAGGATACCCAGCTCCTAGTTCTAGTTCAACATATAGGGAAGGTGGGTATATTAATAAGAATACATCATACAGAA CTTTGGAATTTTATAATACAAGTAAAACTAAATTAGTGAATCTATTTGCTTTTTATAATGGCTGTGTATTTGTTGATGAA AATGGATTAGCTTATTGTATAGGGGAAAATAATATTAATTTCAGAGGCGGTTCAACAACAAATGAAAACAATAGTCTCAG ATTTATCAATAATTCAGGTGTATATTATACTAATACAGACGGAACAGACTATACTTGCTATCAATGGACATATAAATTAA TTCGTTGTTCTATTTTTGATAGTCCCCAAAATATTATAGGAAATAGTAAAAACATATTATACTTATCAAAAAATAATTCT ACATTTAAATGTACAGGAAATTGTATAACTTATGGAATAAATAGTCAAAATTGGTATAGTTATTTTAGTGATAGCAGTAA TGGTGCAATAGCATTAGGTAATGAGTTTATACTAAAAAATTATTCTGGGGAATGTTTGTTAAAAGGGTATGGTAAAGCTA CTAATGGAGAATTTGGAAATTCAACTAATATAAGTAGTATTAGTAATTATGATACAGGATTAAAAGATATAAAAGATATA ATTGTAAAAAATAACACTGTAGTAGTAGTAGATAAAAACAACAATATATATGTAACAGGAGCAAATCAATTTAACAAACT TGGTATAGGAGAATATAACAATCAACCAATAAGAAAATTCACAAATATAACTGAACAATCAAACTCATTTATATTTATGG ATGATATAAAAGAAATTACAACATCAAGAAATACAATGTTTATAGTAAAAAATGATGGAACAGCCTATGCCACAGGAAAT AATAGTTCTGGACAATTAGGATTAGGTGACACAATAAATAGAAATAAGTTCACTCAGATAAACCTTGATAATATAAAGAA AATATCAACAAGTATAGATGGTAACACAACATTTGCAATTAGAAATGATGGAACACTATACTCCACAGGATTAAATACCA AAGGACAACTGGGATTAGGTGATATAGTAAATAGAAATACATTTACCAAAGTAAACATCCAAAATGTAAGAGATGTTGTT TTAGGGACTACTCACTCGCATGCAATCAAAGATGATAACACATTATATTCATGTGGAGAAAACACTCATGGGCAACTGGG CTTAGGAAGCGAAAGCAACCATCCAGACGTATTGACATTTACTGTAAACAATATAACTAATGTAAGAGATGTGTACTGCT CAGATACAACAACATTTATTGTAAAGGACACAAACATTGCATATTGTTGTGGATACAATAATAATTCACAATTAGGTATG GGAAATACTACTGACCAGTATAGTTTTATAAAGTGTATGGAAAATGTAAAAGAAGTTATACCAAATGAAATAAATACCTA TATAATAACAATCTATAATACTGCATATAGTACAGGTTTAAATACTGATTATTGCTTAGGTCTAAATAGTAATAGCAATC AAAGTTCATTTTCTGAAATTCCAATTTCAAATGTAGTAAAAGTAGCTCCAAACAGAAATAATGCAGTACTTTTACTTACA AGTGAAGGGGATGTATATACTGCAGGTAAATGTAGTAATGGTTCAGGTACAGGAAGTGAGACTCCAGAGAAGATTAAAAA AATAGCATCAAAGGCAAAGGACATTGGAATGAATTATAGATGTGGACATTATGTAAGTGATAATGGAGACCTATATGGTA CAGGTTTTAATGATTGTGGGCAATTAGGTGTTGGTAATGTAACAAAAAGAGATACATTTATAAAAACCAATACAAGAGTA AAGAAAATACTTCCTTTAGAATATGCAAATATAGCAATAAAAGATACTAATGATATATATATTTGTGGATTAAATAACTA TGGACAATTAGGTGTTGGAAATAGATACGATAGTAGAAATAATGATAATAGAATATTTAATTATAAGCATATGAATTTTG TAATGGGAGATTTGACATCTATTAAAAACAGACATAACTTTATACTTCTAAACAATAAGATAGTTATACCTACCACAAAA GACATAGATTATGGTTTAGTATTAGGAAATTTATACAAAGGAGACCTTTATACTGAGCTTCCATATGAAGATATAAAAGA AGTATCTATTTCTAAGACTCATATTATTATATTACTTAATGATGGAACAATGTATGGATGTGGTACAAACTACCATGGAG AATTATTGCAAGACTTGTCTATAAATCAAGTGGATGAATTTGTGCAGATTAATGTATCAGATGTAAAGCATGTTTCATGT GGAGATAACTTTACTTACTTTATAAAATCTGATGATAGTCTTTGGTCTATTGGTAAAAATTCCGAATATCAATTAGGTAT AGGTCACAATAATCCAGTTACTGAATTACAAAGAATTACAACTATATCTAGCTGTAAAGAAGTACATTGTGGTAAAAACT ATACATTAGTAGTAACTACAAGTAATGAATTATTTGTACAAGGATATAATGATAAGGGAGCTTTAGGATTAGGAAGCGAT AGTGAAAATACTATAATTAAGTTCTTTACAAAAGCACTAACAGACATAAGAGAAATAAAATCTTATGGAAGTGACCATAT ATTAGTACTTAAAAATGATAATTCAGTATGGGTTACTGGAAAAAATAGGGATGTATATAAAATTGAACAACCAGTAGAAT TTTTAAAAGAATTTACTATAGTACCTATTTCTGAAGATGTAAATACAGTAAAGGATGTACTTGCAACAGACAATACATTA TATATTATATCAGAAGTAGGAACGACAAATGCTGCTATAGAAATTACTGAAAAATCAATTTCATCAATTAAGATAAAAAT ACAAGACCCTAATAAAGATATAAGTAGAATAGAAATGCTTATAAATGGTGAAAGTGTAAAATCTGTAAGTGATTTAATTA CTGAAAAAATATCATTTGAAGTACCACCAGATAAAATTAAAATAGGAGAGAATAAGATACTATTTAGAGCTTATTGTAAA GGTGATGATTTATATGCATCTTTATTTATTTTTAAAGAGAGTACTGGAAATTCTATAATTAAAGATTCTTATGTTATGAT AGGTAATAGAATGTACAAGGTAGTTAATACAACATCTAATGAACAAGATATTACAATTACACTAGATAGAGGGCTTGAAG AAGATTTAAATCTTGGAGACCCTATATATCAATTAATAAATAAAACTAAAGTTCAAGTAAAAATAAATAAATCTGACTTA TTCAAAGACATGAAACTAGTTGAAATCAAAAAATCAGACTCAAGTTACCAAGAAATCTATGAATTAGAAGAAGCCAACAT AAAAAGTGCTCAGCCTAAAATCATAGTAGAAAAAGGAGATAAATGGACAGCTATAAAACGTCCATCTATGATTTTTAGAT ATGATGCTGAAAACAACGAGCCACAAGCTTAA
Upstream 100 bases:
>100_bases TGAGACAAAATCTAGCAACACTTATTTAAAAGAACAAAAAGATATAACTCTAAATAAGTATTCGTATGAAATAAGATAAA TAAAGGGGGTAGTACTAATA
Downstream 100 bases:
>100_bases AATGGAGGTATGAAAATTGTTTAAATTCGATAAAAATAAAATAGAACAAATCAAACAAGGTAGAAAAGTAGAAATGCAGT ATAAAGACATTTCAGACATA
Product: hypothetical protein
Products: NA
Alternate protein names: BNR Repeat-Containing Protein; Alpha-Tubulin Suppressor; S-Layer Domain Protein; RCC1 Repeat-Containing Protein; BNR Repeat Containing Protein; Cell Wall Anchor Domain-Containing Protein; UVB-Resistance; S-Layer Domain-Containing Protein; BNR Repeat Domain Protein; Bnr Repeat Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; RCC1 Domain-Containing Protein; Rhs Family Protein; Ig Domain-Containing Domain-Containing Protein; Cell Surface Receptor IPT/TIG Domain-Containing Protein; IPT/TIG Domain Protein; RCC1 Domain-Containing Protein Alpha-Tubulin Suppressor; Copper Amine Oxidase Domain Protein; Ig Domain Domain Protein; Hyalin; Outer Membrane Adhesin Like Protein; Regulator Of Chromosome Condensation Domain Protein; Beta-Lactamase Inhibitory Protein II; RCC1 Repeat- And Reductase Domain-Containing Protein; Cellulosome Dockerin Type I; RCC1 Repeat Protein; Ig Family Protein; Fibronectin Type III Domain-Containing Protein; RCC1 Repeats Protein; Regulator Of Chromosome Condensation-Like Protein; ATS1 Domain Repeat Protein; Copper Amine Oxidase Domain-Containing Protein; Lipoprotein; BNR Repeat Domain-Containing Protein
Number of amino acids: Translated: 1743; Mature: 1743
Protein sequence:
>1743_residues MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKI DNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSG QLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASR NTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDN SEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVE KIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDE NGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDI IVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGN NSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGM GNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLT SEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTK DIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSC GDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTL YIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCK GDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA
Sequences:
>Translated_1743_residues MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKI DNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSG QLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASR NTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDN SEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVE KIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDE NGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDI IVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGN NSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGM GNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLT SEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTK DIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSC GDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTL YIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCK GDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA >Mature_1743_residues MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKI DNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSG QLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASR NTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDN SEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVE KIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDE NGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDI IVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGN NSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGM GNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLT SEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTK DIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSC GDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTL YIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCK GDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA
Specific function: Unknown
COG id: COG5184
COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI63025188, Length=332, Percent_Identity=30.1204819277108, Blast_Score=118, Evalue=6e-26, Organism=Homo sapiens, GI37620181, Length=332, Percent_Identity=30.1204819277108, Blast_Score=118, Evalue=6e-26, Organism=Homo sapiens, GI4506581, Length=294, Percent_Identity=30.6122448979592, Blast_Score=116, Evalue=2e-25, Organism=Homo sapiens, GI78190492, Length=294, Percent_Identity=30.6122448979592, Blast_Score=115, Evalue=3e-25, Organism=Homo sapiens, GI7657152, Length=304, Percent_Identity=27.9605263157895, Blast_Score=111, Evalue=7e-24, Organism=Homo sapiens, GI57242759, Length=276, Percent_Identity=30.4347826086957, Blast_Score=104, Evalue=1e-21, Organism=Homo sapiens, GI126131099, Length=372, Percent_Identity=28.2258064516129, Blast_Score=100, Evalue=2e-20, Organism=Homo sapiens, GI4557445, Length=277, Percent_Identity=28.8808664259928, Blast_Score=100, Evalue=2e-20, Organism=Homo sapiens, GI61563742, Length=323, Percent_Identity=28.1733746130031, Blast_Score=100, Evalue=2e-20, Organism=Homo sapiens, GI259089405, Length=323, Percent_Identity=28.1733746130031, Blast_Score=100, Evalue=2e-20, Organism=Homo sapiens, GI126032348, Length=344, Percent_Identity=25.5813953488372, Blast_Score=98, Evalue=6e-20, Organism=Homo sapiens, GI222136641, Length=319, Percent_Identity=26.3322884012539, Blast_Score=95, Evalue=5e-19, Organism=Homo sapiens, GI110825982, Length=241, Percent_Identity=28.6307053941909, Blast_Score=86, Evalue=3e-16, Organism=Homo sapiens, GI13540582, Length=252, Percent_Identity=29.3650793650794, Blast_Score=82, Evalue=4e-15, Organism=Homo sapiens, GI30039692, Length=269, Percent_Identity=24.1635687732342, Blast_Score=82, Evalue=4e-15, Organism=Homo sapiens, GI4502801, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14, Organism=Homo sapiens, GI114796646, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14, Organism=Homo sapiens, GI114796644, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14, Organism=Homo sapiens, GI114796642, Length=334, Percent_Identity=25.1497005988024, Blast_Score=78, Evalue=6e-14, Organism=Homo sapiens, GI209969703, Length=234, Percent_Identity=25.2136752136752, Blast_Score=77, Evalue=2e-13, Organism=Homo sapiens, GI29789090, Length=234, Percent_Identity=25.2136752136752, Blast_Score=77, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988539, Length=291, Percent_Identity=28.5223367697594, Blast_Score=92, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17510153, Length=473, Percent_Identity=24.3128964059197, Blast_Score=91, Evalue=4e-18, Organism=Drosophila melanogaster, GI24655113, Length=289, Percent_Identity=30.1038062283737, Blast_Score=116, Evalue=2e-25, Organism=Drosophila melanogaster, GI24655115, Length=289, Percent_Identity=30.1038062283737, Blast_Score=116, Evalue=2e-25, Organism=Drosophila melanogaster, GI281361147, Length=233, Percent_Identity=26.6094420600858, Blast_Score=99, Evalue=2e-20, Organism=Drosophila melanogaster, GI24649791, Length=272, Percent_Identity=26.8382352941176, Blast_Score=85, Evalue=5e-16, Organism=Drosophila melanogaster, GI24582121, Length=330, Percent_Identity=25.1515151515152, Blast_Score=79, Evalue=4e-14, Organism=Drosophila melanogaster, GI20129257, Length=330, Percent_Identity=25.1515151515152, Blast_Score=79, Evalue=4e-14, Organism=Drosophila melanogaster, GI24580714, Length=361, Percent_Identity=25.207756232687, Blast_Score=70, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 193604; Mature: 193604
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00626 RCC1_2 ; PS50012 RCC1_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTG CCCCHHHHCCCEECCCCEEEECHHCCCCCCCHHHHHHCCCCCCCEECCCCCEEEECCCCC FQLGLGKDSSERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTV EEEEECCCCHHHHHHHEEEECCEEEEECCCCCEEEEEECCEEECCCCCCCCCEEEEEEEE YYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSGQLGLGDTNNRVTFTKVNIDS EEEEEECCHHHCEEEEECCEEEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEEHHH VKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH HHHHEEECCEEEEEEECCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHCCCCC TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLF EEEEECCCEEEEECCCCCEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCEEE STGQNNYGQLANANKDVASRNTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQ ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCCHHH LGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIEL HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCEEEEEEECCCCCCCEEEEE TDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN ECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECC GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSY CEEEECCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCCCCEEEEECCCCEEEECCCCEE IVYGDNRNYPYKDTRVSNVEKIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTY EEECCCCCCCCCCCCCCCHHEEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC REGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDENGLAYCIGENNINFRGGSTT CCCCEECCCCCEEEEEEECCCCHHEEEEEEEECCEEEEECCCEEEEEECCCEEECCCCCC NENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS CCCCCEEEEECCCEEEECCCCCCEEEHHEEEEEEEEEECCCCHHHCCCCCCEEEEECCCC TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGN EEEEECCEEEEECCCCCEEEEECCCCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCC STNISSISNYDTGLKDIKDIIVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKF CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH TNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQI HCHHHCCCCEEEEECHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEE NLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV EHHHHEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCCEEE LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFI EECCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEECCCEEEE VKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGL EEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECEECCCC NTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTGSE CCEEEEEECCCCCCCCHHCCCCCCEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCC TPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV CHHHHHHHHHHHHHCCCCEECCEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCE KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTS EEEECEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEHHHHH IKNRHNFILLNNKIVIPTTKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLN HCCCCCEEEECCEEEEECCCCCCEEEEEECEECCCEEEECCHHHHHHCEECCEEEEEEEC DGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSCGDNFTYFIKSDDSLWSIGKN CCEEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHEEEEECCCCEEEEEECCCCEEECCCC SEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCEECCCC SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTI CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEEEHHHHHHHHCCEE VPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEML EEECCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCEEEEEE INGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSII ECCCHHHHHHHHHHHHEEECCCCCCEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEE KDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL ECCEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEECHHHH FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNE HCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCCC PQA CCC >Mature Secondary Structure MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTG CCCCHHHHCCCEECCCCEEEECHHCCCCCCCHHHHHHCCCCCCCEECCCCCEEEECCCCC FQLGLGKDSSERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTV EEEEECCCCHHHHHHHEEEECCEEEEECCCCCEEEEEECCEEECCCCCCCCCEEEEEEEE YYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSGQLGLGDTNNRVTFTKVNIDS EEEEEECCHHHCEEEEECCEEEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEEHHH VKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSH HHHHEEECCEEEEEEECCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHCCCCC TILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLF EEEEECCCEEEEECCCCCEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCEEE STGQNNYGQLANANKDVASRNTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQ ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCCHHH LGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIEL HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCEEEEEEECCCCCCCEEEEE TDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNN ECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECC GTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSY CEEEECCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCCCCEEEEECCCCEEEECCCCEE IVYGDNRNYPYKDTRVSNVEKIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTY EEECCCCCCCCCCCCCCCHHEEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC REGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDENGLAYCIGENNINFRGGSTT CCCCEECCCCCEEEEEEECCCCHHEEEEEEEECCEEEEECCCEEEEEECCCEEECCCCCC NENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNS CCCCCEEEEECCCEEEECCCCCCEEEHHEEEEEEEEEECCCCHHHCCCCCCEEEEECCCC TFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGN EEEEECCEEEEECCCCCEEEEECCCCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCC STNISSISNYDTGLKDIKDIIVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKF CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH TNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQI HCHHHCCCCEEEEECHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEE NLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVV EHHHHEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCHHCCCCEEEEEECCCCCEEE LGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFI EECCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEECCCEEEE VKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGL EEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECEECCCC NTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTGSE CCEEEEEECCCCCCCCHHCCCCCCEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCC TPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRV CHHHHHHHHHHHHHCCCCEECCEEECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCE KKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTS EEEECEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEHHHHH IKNRHNFILLNNKIVIPTTKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLN HCCCCCEEEECCEEEEECCCCCCEEEEEECEECCCEEEECCHHHHHHCEECCEEEEEEEC DGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSCGDNFTYFIKSDDSLWSIGKN CCEEEECCCCCCHHHHHCCCCCCCCEEEEEEHHHEEEEECCCCEEEEEECCCCEEECCCC SEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSD CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCEECCCC SENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTI CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEEEHHHHHHHHCCEE VPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEML EEECCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCEEEEEE INGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSII ECCCHHHHHHHHHHHHEEECCCCCCEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEE KDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDL ECCEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEECHHHH FKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNE HCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCCCC PQA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA