Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698973

Identifier: 126698973

GI number: 126698973

Start: 1585879

End: 1586577

Strand: Direct

Name: 126698973

Synonym: CD1372

Alternate gene names: NA

Gene position: 1585879-1586577 (Clockwise)

Preceding gene: 126698972

Following gene: 126698974

Centisome position: 36.96

GC content: 30.04

Gene sequence:

>699_bases
ATGAAGCTAATTGATAAACTACCATCATTTGATAGAAATTACATTGTAGAGGAGATACAAGGTGCATACGATACAGAATT
AAATATTCTTAAAGAAGATATTGATGATACCTTTAACCAATTATTTGTTGACACTGCAACATGGGGATTAGATATGTGGG
AAGACATACTCTGCATTGAAAAAAAAGAACTTGATTTTGACACAAGACGTAGCAATATAAAAGCTAAAATGAGAAGCAGA
GGTACTAGTACTATTGAAGTTATAAAAAGTATATGTGAGGCATATACAAAATCAGAAACAGATATAAAAGTTTATAGTGA
TGAATTTACATTCGTATTGAGTTTTATAGCAAATAACTGTGACTATAAAACTCTTTTAGATTGTAGTGATATGATTGAAA
GAGTAAAACCTGCTCACTTATTACACTATTTAGAACCAATAATACTAGATAAAAGTATGGTCTATTGTGGTGGAGGTATG
GTATGTAGTGAAGAGGTAAAAGTTCATCCATACTTTGAACCAATTATAAAATGTAGTGCTGTTGTAAACTGTGGAGCTGG
AATGTTAAGTAGAGAAGAAATAAAGGTTTATCCTTTAAGCATTAAATGCATTGAAAATAATTGTAAGATTAATATAGCTA
TTGCAAATGATACAGGTGTAGAAAATGTAGTAGTTTATCCTAAATCGGAGGTGGTATAA

Upstream 100 bases:

>100_bases
TAAGTAACCTACTTATAAATGGAAGTACAGATAATATAACTATTAATGAAGATAAAATACCTAGTGTAACAACTGTTAAT
TTTAGTGAGGTGGAAAATCA

Downstream 100 bases:

>100_bases
TTGGAAGAAAAATTTTATATAATATTAACCAAAATTGGTAGAGAAAAAATAGCAAATGCAACTGCACTAGGAGAGCTTGT
TGGATTAACCAAGTTTCAAG

Product: phage protein

Products: NA

Alternate protein names: Phage Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSR
GTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGM
VCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV

Sequences:

>Translated_232_residues
MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSR
GTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGM
VCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
>Mature_232_residues
MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSR
GTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGM
VCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26445; Mature: 26445

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIE
CCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KKELDFDTRRSNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNC
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCC
DYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSA
CCHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCEEECCCCEECCCHHHHHHHHH
VVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
HHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIE
CCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KKELDFDTRRSNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNC
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCC
DYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSA
CCHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCEEECCCCEECCCHHHHHHHHH
VVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
HHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA