| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698962
Identifier: 126698962
GI number: 126698962
Start: 1576661
End: 1577104
Strand: Direct
Name: 126698962
Synonym: CD1362
Alternate gene names: NA
Gene position: 1576661-1577104 (Clockwise)
Preceding gene: 126698961
Following gene: 126698963
Centisome position: 36.75
GC content: 25.9
Gene sequence:
>444_bases TTGCTTAAATACAAGGAAATATTAGAAACAATTATTGAGATTCTCAAAAAAAACTTTACTGAAAGTATTTTTATTGATGA TGAAAGTGTGCAAGGCTCTGAAGGGTCTTGTTTTTTTGTAAGTATACTATCAGTTATTTGTACACCTGTAATGTTAAATA CGAATAACAAAGATATTGTTATCTCTATAAAATACTTACCAAAACCACAGTCAAAGAGTATTAGAATGTATGAAGTTTCA GATGAATTAAATAAGCTATTTAACAGAAATATAAAGGTAACAGACAGAAAATTAAATATAACAAAGCTAGAACAAAGTAT TAAAAAAGAAGAGTCAATTTATGTATTGAACTTTACACTTACACTAAACTATCTGGATAGTGTATATGAAGAAGATGTAG TATATGAAAATATGGAAGAAATCAATTTAAATTTAGGAGAGTGA
Upstream 100 bases:
>100_bases TGACAGGAATAAATGAGATATATATTTAAAAATGACTTATATCATTTATAGTAAGATTATCAGATTAAGCAAGAATATTT AGTGATAGTGTGGTGATTAT
Downstream 100 bases:
>100_bases TAGTATGGCTATAGGATTACCAAGTATCAACATATCATTTAAGGAGCTAGCTACAACTGTTAAAGAACGTTCAGCTAGAG GAATAATTGCAATGGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVS DELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE
Sequences:
>Translated_147_residues MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVS DELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE >Mature_147_residues MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVS DELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17134; Mature: 17134
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIV CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEE ISIKYLPKPQSKSIRMYEVSDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTL EEEEECCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEEE TLNYLDSVYEEDVVYENMEEINLNLGE EEHHHHHHHHHHHHHCCHHHCCEECCC >Mature Secondary Structure MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIV CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEE ISIKYLPKPQSKSIRMYEVSDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTL EEEEECCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEEE TLNYLDSVYEEDVVYENMEEINLNLGE EEHHHHHHHHHHHHHCCHHHCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA