| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is dapG [H]
Identifier: 126698921
GI number: 126698921
Start: 1532100
End: 1533323
Strand: Direct
Name: dapG [H]
Synonym: CD1322
Alternate gene names: 126698921
Gene position: 1532100-1533323 (Clockwise)
Preceding gene: 126698920
Following gene: 126698922
Centisome position: 35.71
GC content: 31.7
Gene sequence:
>1224_bases ATGAGTATTTTAGTGCAAAAGTTTGGTGGGACATCAGTAGAATCATATGAAAAAATGAATGAAGTATGTAAGATAGTAAA AGCATACAAAAAAAATGATGAAGAATTACAATTAGTATTAGTAGTTTCAGCAATGGGAAGAAAAGGAGCTCCATATGCTA CAGATACACTTATAAATTTGTGTAGTGCAGTAAATGATGAGCCAAGTAAAAGAGAACTTGATTTAATAATGTCTTGTGGA GAAATAATATCAGGAACAATTCTTGCTAATTTATTGAATGCACAGGGGATAGATTCTGTTTTCTTTACTGGTCAGCAAGC AGGTATAATTACAAGTGATGAATATTCTAATGCAAAGATAAAGTATATAAATCCTAAAAAGGTAAAAAGAGCTTTAGATG ATGGTAAGGTTGTAGTTATAGCTGGGTTCCAGGGTGTAACAGATGATGGAGAAATAACTACTCTTGGAAGAGGCGGAAGC GATACATCAGCAGTTGCTATTGGTAAAGCTTTAGAATGTGAAACAGTTGAAATTTACACTGATGTGGATGGTATAATGAC TGCAGACCCTAGAGTAGAACCAAACGCTAAAGTATTGAGTTTTATAGACTATGAGGAAGTATTCCAAATGGCTGACAAAG GTGCAAAAGTAATACATCCAAGAGCAGTACAGTTGGCTAAAAGTGGAAATATAACTTTAGCCATAAAGAATACAATGAAT CCAACTTTTGAAGGTACAAAAATAGGTTCTTTATGTAGACACTTAGAAGACAATATAGAATATGAACAAGAAAGAGATTT TAAGGTTGCTGTTGCAAATAAAGATAGCGTAGCACAAGTTAAGATTAAGTCAGCAGAAGAAGTGTTTACAGAAGTATTAA ATGAGATAGAAAAGAAACTTATAACTATAGATATGATAAATTTCTTTATATCAGAAAAAGCATTTGTTGTAGAAGATGCT GATATAAAATCATTAAAGGAAATACTAGATAAATTTGAATTAGATTATGAAGTAAATAGAGACTGTGCTAAGGTAACATT GATATGTTCAAGAATTGCTGATGAAATGTCTGGTATCATGTCAAAGGTAGTTAGAGGATTATCAAAAGCAGGGGTATCTC TTTTACAAACATCAGACTCAAATATGACTATATCTTGTTTAGTTAGTGAAGAAGATATGCATACAGCAGTACATGCTATA CACCAACAATTTTATTTAAAATAA
Upstream 100 bases:
>100_bases AAAAGATAAGTCATTTTTAGAAGTACCATGGAGAAATGTAAAAAAAATAGGTAATGACATGATAATTATAGAATATGAGG GATATATTTAGGAGGAAAAA
Downstream 100 bases:
>100_bases ACTGTATAATACAATTATTTTTTAATCAAATTTAAGAATTTCATATATATCTTAATATATTTGATTTATTTGGTAAAACT AAATTAAATATAATTTTGAT
Product: aspartate kinase I
Products: NA
Alternate protein names: Aspartate kinase 1; Aspartokinase I [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSILVQKFGGTSVESYEKMNEVCKIVKAYKKNDEELQLVLVVSAMGRKGAPYATDTLINLCSAVNDEPSKRELDLIMSCG EIISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKIKYINPKKVKRALDDGKVVVIAGFQGVTDDGEITTLGRGGS DTSAVAIGKALECETVEIYTDVDGIMTADPRVEPNAKVLSFIDYEEVFQMADKGAKVIHPRAVQLAKSGNITLAIKNTMN PTFEGTKIGSLCRHLEDNIEYEQERDFKVAVANKDSVAQVKIKSAEEVFTEVLNEIEKKLITIDMINFFISEKAFVVEDA DIKSLKEILDKFELDYEVNRDCAKVTLICSRIADEMSGIMSKVVRGLSKAGVSLLQTSDSNMTISCLVSEEDMHTAVHAI HQQFYLK
Sequences:
>Translated_407_residues MSILVQKFGGTSVESYEKMNEVCKIVKAYKKNDEELQLVLVVSAMGRKGAPYATDTLINLCSAVNDEPSKRELDLIMSCG EIISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKIKYINPKKVKRALDDGKVVVIAGFQGVTDDGEITTLGRGGS DTSAVAIGKALECETVEIYTDVDGIMTADPRVEPNAKVLSFIDYEEVFQMADKGAKVIHPRAVQLAKSGNITLAIKNTMN PTFEGTKIGSLCRHLEDNIEYEQERDFKVAVANKDSVAQVKIKSAEEVFTEVLNEIEKKLITIDMINFFISEKAFVVEDA DIKSLKEILDKFELDYEVNRDCAKVTLICSRIADEMSGIMSKVVRGLSKAGVSLLQTSDSNMTISCLVSEEDMHTAVHAI HQQFYLK >Mature_406_residues SILVQKFGGTSVESYEKMNEVCKIVKAYKKNDEELQLVLVVSAMGRKGAPYATDTLINLCSAVNDEPSKRELDLIMSCGE IISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKIKYINPKKVKRALDDGKVVVIAGFQGVTDDGEITTLGRGGSD TSAVAIGKALECETVEIYTDVDGIMTADPRVEPNAKVLSFIDYEEVFQMADKGAKVIHPRAVQLAKSGNITLAIKNTMNP TFEGTKIGSLCRHLEDNIEYEQERDFKVAVANKDSVAQVKIKSAEEVFTEVLNEIEKKLITIDMINFFISEKAFVVEDAD IKSLKEILDKFELDYEVNRDCAKVTLICSRIADEMSGIMSKVVRGLSKAGVSLLQTSDSNMTISCLVSEEDMHTAVHAIH QQFYLK
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartokinase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=288, Percent_Identity=28.125, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1790455, Length=300, Percent_Identity=27.6666666666667, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790376, Length=176, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320893, Length=379, Percent_Identity=26.9129287598945, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 44700; Mature: 44569
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILVQKFGGTSVESYEKMNEVCKIVKAYKKNDEELQLVLVVSAMGRKGAPYATDTLINL CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHH CSAVNDEPSKRELDLIMSCGEIISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCEE KYINPKKVKRALDDGKVVVIAGFQGVTDDGEITTLGRGGSDTSAVAIGKALECETVEIYT EEECHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEE DVDGIMTADPRVEPNAKVLSFIDYEEVFQMADKGAKVIHPRAVQLAKSGNITLAIKNTMN CCCCEEECCCCCCCCCCEEEECCHHHHHHHHHCCCEEECCHHHHEECCCCEEEEEECCCC PTFEGTKIGSLCRHLEDNIEYEQERDFKVAVANKDSVAQVKIKSAEEVFTEVLNEIEKKL CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHH ITIDMINFFISEKAFVVEDADIKSLKEILDKFELDYEVNRDCAKVTLICSRIADEMSGIM HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH SKVVRGLSKAGVSLLQTSDSNMTISCLVSEEDMHTAVHAIHQQFYLK HHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SILVQKFGGTSVESYEKMNEVCKIVKAYKKNDEELQLVLVVSAMGRKGAPYATDTLINL CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHH CSAVNDEPSKRELDLIMSCGEIISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCEE KYINPKKVKRALDDGKVVVIAGFQGVTDDGEITTLGRGGSDTSAVAIGKALECETVEIYT EEECHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEE DVDGIMTADPRVEPNAKVLSFIDYEEVFQMADKGAKVIHPRAVQLAKSGNITLAIKNTMN CCCCEEECCCCCCCCCCEEEECCHHHHHHHHHCCCEEECCHHHHEECCCCEEEEEECCCC PTFEGTKIGSLCRHLEDNIEYEQERDFKVAVANKDSVAQVKIKSAEEVFTEVLNEIEKKL CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHH ITIDMINFFISEKAFVVEDADIKSLKEILDKFELDYEVNRDCAKVTLICSRIADEMSGIM HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH SKVVRGLSKAGVSLLQTSDSNMTISCLVSEEDMHTAVHAIHQQFYLK HHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]