| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698894
Identifier: 126698894
GI number: 126698894
Start: 1503826
End: 1504455
Strand: Direct
Name: 126698894
Synonym: CD1297
Alternate gene names: NA
Gene position: 1503826-1504455 (Clockwise)
Preceding gene: 126698893
Following gene: 126698895
Centisome position: 35.05
GC content: 21.43
Gene sequence:
>630_bases ATGGAGCTTAATGAATTATTTAATTTTAAGTATTTAATAATAGCTGTAATTTTTATTATAAGTGTAACTATGTTGATTTT AATATCTCATATAAACATCTTAATAATAGCTGATATAAAAAACAAAGATATTTGTTTAAAGCTTAATATAAAATACATGT TTAATTTAATAAATATAAATAGACAACTTTATCCAGCTGAAAATAGTAAAAATAATGATAAAAAAGAGGGGATGAAGAAT AATATAGATTCAAGTATATTATTAGCTGATGACCTTTTGAGCATTTATAGATTATTAAAAAAGATAAAAATACATGAACT TTATTCAAATATTAATTTTGGAACTGGAAATATTGGCTTAACATCTTCTGTATATGTATTGATAAATACTTTGTATGGAA ATTTATTTAATATGATTGATGCAGAAAAAATGTATTTAAATGTAAATCCAGATTTTACAAAAGATTATGTTTTAGGAAAT ATAAGGATACATATAAGGCCAAGAATAAAAGCTTTATTTAATATTATAATAATGATTAATAAAATTATGAATAAAAATAA AGGAAATAAGGAAGGTGATAGTAATGAGAGCAACAGGTTCGATACAGAGTCTTATGGAAACAACTCTTGA
Upstream 100 bases:
>100_bases AAGTTGTTGTGTTTTTTTGTATAAATATAAAATTATAATTCTCTTAAAATAAATATGGATAATTAAGTATAAATAGTAAT TTTTTGATGATAATATAAAC
Downstream 100 bases:
>100_bases AACAATTAAAGGTTCTATAGATGCAAATACTATTATAGGAGACCCTATAAAAACAGATACTACAGTGGTTGTACCTATAT CAAAGGTTACAATTGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MELNELFNFKYLIIAVIFIISVTMLILISHINILIIADIKNKDICLKLNIKYMFNLININRQLYPAENSKNNDKKEGMKN NIDSSILLADDLLSIYRLLKKIKIHELYSNINFGTGNIGLTSSVYVLINTLYGNLFNMIDAEKMYLNVNPDFTKDYVLGN IRIHIRPRIKALFNIIIMINKIMNKNKGNKEGDSNESNRFDTESYGNNS
Sequences:
>Translated_209_residues MELNELFNFKYLIIAVIFIISVTMLILISHINILIIADIKNKDICLKLNIKYMFNLININRQLYPAENSKNNDKKEGMKN NIDSSILLADDLLSIYRLLKKIKIHELYSNINFGTGNIGLTSSVYVLINTLYGNLFNMIDAEKMYLNVNPDFTKDYVLGN IRIHIRPRIKALFNIIIMINKIMNKNKGNKEGDSNESNRFDTESYGNNS >Mature_209_residues MELNELFNFKYLIIAVIFIISVTMLILISHINILIIADIKNKDICLKLNIKYMFNLININRQLYPAENSKNNDKKEGMKN NIDSSILLADDLLSIYRLLKKIKIHELYSNINFGTGNIGLTSSVYVLINTLYGNLFNMIDAEKMYLNVNPDFTKDYVLGN IRIHIRPRIKALFNIIIMINKIMNKNKGNKEGDSNESNRFDTESYGNNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24133; Mature: 24133
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNELFNFKYLIIAVIFIISVTMLILISHINILIIADIKNKDICLKLNIKYMFNLININ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHHCC RQLYPAENSKNNDKKEGMKNNIDSSILLADDLLSIYRLLKKIKIHELYSNINFGTGNIGL CEEECCCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TSSVYVLINTLYGNLFNMIDAEKMYLNVNPDFTKDYVLGNIRIHIRPRIKALFNIIIMIN HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHH KIMNKNKGNKEGDSNESNRFDTESYGNNS HHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MELNELFNFKYLIIAVIFIISVTMLILISHINILIIADIKNKDICLKLNIKYMFNLININ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHHCC RQLYPAENSKNNDKKEGMKNNIDSSILLADDLLSIYRLLKKIKIHELYSNINFGTGNIGL CEEECCCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TSSVYVLINTLYGNLFNMIDAEKMYLNVNPDFTKDYVLGNIRIHIRPRIKALFNIIIMIN HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHH KIMNKNKGNKEGDSNESNRFDTESYGNNS HHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA