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The map label for this gene is yfhP [C]

Identifier: 126698875

GI number: 126698875

Start: 1484813

End: 1485259

Strand: Direct

Name: yfhP [C]

Synonym: CD1278

Alternate gene names: 126698875

Gene position: 1484813-1485259 (Clockwise)

Preceding gene: 126698874

Following gene: 126698876

Centisome position: 34.61

GC content: 28.64

Gene sequence:

>447_bases
ATGAAGTTGTCTACTAAAGGTAGATATGGACTAAAAGCAATGTTTGAATTAGCATTAAATCAAGACAATGGACCAGTATC
ATTAAAATTTATTGCTAAGAAGCAAAAAATATCAGATCAGTACTTAGAACAAATATTTTCATCTTTAAAAAAATCGGGTC
TAGTAAAAAGTGTGAGAGGTGCTCAAGGAGGTTATTTGCTTTCAAAGAATGCTGAAGACATAACAGTAGGAGATATACTT
GTAGTATTAGAAGGACCAGTTGCATTATCTGACTGTGTACTAGATGAAGATGTATGTGAAAACTCAAACATGTGTGTAAC
AAAAATAGTTTGGGAAAAGATGAAAAAGGGTATAGAAGATGTTATAGATTCAATTACTCTTAAAGATATGATAAATGACT
ATAACAAAAATAAATTAGAAAATGATATAACAAATATTAAAAAATAG

Upstream 100 bases:

>100_bases
AATTAATCTTGACAAAATTAGTAGGGTATAATAAAATTATCTTGAAAGTAATTCCTACTAAAACAGTATGAATTAGATTT
CTATATAGAGGTGATAATAT

Downstream 100 bases:

>100_bases
ATTTGGAGATGAATGTAATGGAAAAAAGAAGATTGTATATGGATTATTCTGCAACAACACCTATTAAAAAAGAAGTATTG
GATGCAATGATGCCATACCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKLSTKGRYGLKAMFELALNQDNGPVSLKFIAKKQKISDQYLEQIFSSLKKSGLVKSVRGAQGGYLLSKNAEDITVGDIL
VVLEGPVALSDCVLDEDVCENSNMCVTKIVWEKMKKGIEDVIDSITLKDMINDYNKNKLENDITNIKK

Sequences:

>Translated_148_residues
MKLSTKGRYGLKAMFELALNQDNGPVSLKFIAKKQKISDQYLEQIFSSLKKSGLVKSVRGAQGGYLLSKNAEDITVGDIL
VVLEGPVALSDCVLDEDVCENSNMCVTKIVWEKMKKGIEDVIDSITLKDMINDYNKNKLENDITNIKK
>Mature_148_residues
MKLSTKGRYGLKAMFELALNQDNGPVSLKFIAKKQKISDQYLEQIFSSLKKSGLVKSVRGAQGGYLLSKNAEDITVGDIL
VVLEGPVALSDCVLDEDVCENSNMCVTKIVWEKMKKGIEDVIDSITLKDMINDYNKNKLENDITNIKK

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=133, Percent_Identity=40.6015037593985, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI1790621, Length=133, Percent_Identity=27.8195488721804, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16477; Mature: 16477

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTKGRYGLKAMFELALNQDNGPVSLKFIAKKQKISDQYLEQIFSSLKKSGLVKSVRG
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
AQGGYLLSKNAEDITVGDILVVLEGPVALSDCVLDEDVCENSNMCVTKIVWEKMKKGIED
CCCCEEEECCCCCEEHHHEEEEEECCCHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHH
VIDSITLKDMINDYNKNKLENDITNIKK
HHHHHHHHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSTKGRYGLKAMFELALNQDNGPVSLKFIAKKQKISDQYLEQIFSSLKKSGLVKSVRG
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
AQGGYLLSKNAEDITVGDILVVLEGPVALSDCVLDEDVCENSNMCVTKIVWEKMKKGIED
CCCCEEEECCCCCEEHHHEEEEEECCCHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHH
VIDSITLKDMINDYNKNKLENDITNIKK
HHHHHHHHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]