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The map label for this gene is nudF [H]

Identifier: 126698816

GI number: 126698816

Start: 1418470

End: 1419006

Strand: Direct

Name: nudF [H]

Synonym: CD1220

Alternate gene names: 126698816

Gene position: 1418470-1419006 (Clockwise)

Preceding gene: 126698815

Following gene: 126698817

Centisome position: 33.06

GC content: 29.61

Gene sequence:

>537_bases
ATGGTATTAGAAGAAAAAACTATTAGTAGTGATAGGGTTTATACAGGTAAAGTAATTACTTTAAAGGTTGATACTGTTGA
AATTCCAGGGCAAGGATATCAAAAAAGGGAGTTAGTAGAAGTTGGTGGAGCAGTAGGAATAGTTGCAATCACAGATGATA
ATAAAGTTGTGTTAGTTAAGCAATTTAGAAAACCTATAGAAAAGCCAATCTTTGAAATTCCAGCTGGTAAACTAGAAAAA
AATGAAAGTCCAAAAGAATGTGCTGAAAGAGAATTAAAAGAAGAAACTGGGTATAGTGCAAAAAATATTAAGCTAATACA
TAAATTTTTCACTTCAGCAGGTTTTTCTAATGAGATAATGTTTGTATATTTAGCAACAGGTCTTACTCCAGGAGAGAATA
ATTTAGATGCAGATGAGTTTTTAGATGTCTATGAAATTGAGCTTGAAGAAGCATATAACATGGTATTAAAAAATGACGTT
GAAGATGCAAAAACATCTATTGGATTATTATTAGTAAAAGATATGTTTAAAAATTAA

Upstream 100 bases:

>100_bases
TTTAATCTAAAAGTAAAGAGTATGGGAAGAAATTATGAACAAGATGAGGCATTTTTCAAAGCTGCAAGCACAGCAGCATA
TTACTTAATGGAGGTTTAAG

Downstream 100 bases:

>100_bases
TATTTATAAAATGAATAACCCTTTGTCCTAAAGCATACTATTTTATAAAGGACAAGGGGGAATTAAATTGAGAAGAACAT
ATAGAAAAAATGATTTTAGA

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; ASPPase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MVLEEKTISSDRVYTGKVITLKVDTVEIPGQGYQKRELVEVGGAVGIVAITDDNKVVLVKQFRKPIEKPIFEIPAGKLEK
NESPKECAERELKEETGYSAKNIKLIHKFFTSAGFSNEIMFVYLATGLTPGENNLDADEFLDVYEIELEEAYNMVLKNDV
EDAKTSIGLLLVKDMFKN

Sequences:

>Translated_178_residues
MVLEEKTISSDRVYTGKVITLKVDTVEIPGQGYQKRELVEVGGAVGIVAITDDNKVVLVKQFRKPIEKPIFEIPAGKLEK
NESPKECAERELKEETGYSAKNIKLIHKFFTSAGFSNEIMFVYLATGLTPGENNLDADEFLDVYEIELEEAYNMVLKNDV
EDAKTSIGLLLVKDMFKN
>Mature_178_residues
MVLEEKTISSDRVYTGKVITLKVDTVEIPGQGYQKRELVEVGGAVGIVAITDDNKVVLVKQFRKPIEKPIFEIPAGKLEK
NESPKECAERELKEETGYSAKNIKLIHKFFTSAGFSNEIMFVYLATGLTPGENNLDADEFLDVYEIELEEAYNMVLKNDV
EDAKTSIGLLLVKDMFKN

Specific function: Acts on ADP-mannose and ADP-glucose as well as ADP- ribose. Prevents glycogen biosynthesis. The reaction catalyzed by this enzyme is a limiting step of the gluconeogenic process [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319587, Length=152, Percent_Identity=32.2368421052632, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 19968; Mature: 19968

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLEEKTISSDRVYTGKVITLKVDTVEIPGQGYQKRELVEVGGAVGIVAITDDNKVVLVK
CCCCCCCCCCCCEEECEEEEEEEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCEEEHH
QFRKPIEKPIFEIPAGKLEKNESPKECAERELKEETGYSAKNIKLIHKFFTSAGFSNEIM
HHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE
FVYLATGLTPGENNLDADEFLDVYEIELEEAYNMVLKNDVEDAKTSIGLLLVKDMFKN
EEEEECCCCCCCCCCCHHHHHHHHHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLEEKTISSDRVYTGKVITLKVDTVEIPGQGYQKRELVEVGGAVGIVAITDDNKVVLVK
CCCCCCCCCCCCEEECEEEEEEEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCEEEHH
QFRKPIEKPIFEIPAGKLEKNESPKECAERELKEETGYSAKNIKLIHKFFTSAGFSNEIM
HHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE
FVYLATGLTPGENNLDADEFLDVYEIELEEAYNMVLKNDVEDAKTSIGLLLVKDMFKN
EEEEECCCCCCCCCCCHHHHHHHHHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 10542272 [H]